Protein Info for B158DRAFT_0944 in Kangiella aquimarina DSM 16071

Annotation: Uncharacterized protein involved in response to NO

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 425 transmembrane" amino acids 25 to 45 (21 residues), see Phobius details amino acids 52 to 76 (25 residues), see Phobius details amino acids 84 to 102 (19 residues), see Phobius details amino acids 108 to 126 (19 residues), see Phobius details amino acids 138 to 156 (19 residues), see Phobius details amino acids 168 to 189 (22 residues), see Phobius details amino acids 210 to 228 (19 residues), see Phobius details amino acids 234 to 252 (19 residues), see Phobius details amino acids 264 to 287 (24 residues), see Phobius details amino acids 293 to 312 (20 residues), see Phobius details amino acids 328 to 349 (22 residues), see Phobius details amino acids 362 to 382 (21 residues), see Phobius details PF05940: NnrS" amino acids 25 to 380 (356 residues), 151.6 bits, see alignment E=2.1e-48

Best Hits

KEGG orthology group: None (inferred from 85% identity to kko:Kkor_2036)

Predicted SEED Role

"NnrS protein involved in response to NO" in subsystem Denitrification or Nitrosative stress or Oxidative stress

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (425 amino acids)

>B158DRAFT_0944 Uncharacterized protein involved in response to NO (Kangiella aquimarina DSM 16071)
MYFKYIFRVYHDQGKSVNKVSAQNLFFPAACIHAAITAVLTVLAYQFSSEWLTAFVGFGH
AHEMLFGFALALIAGYTLGQIEAGWLWALFGLWLFARIGYWLDPAGVIGQWSSPLFALAL
AWKIVPRFFAAKKWRNRMISPLLMAICSVPLAWLLLREMGWPVAPTQLSVAMILLLVMLM
AFIGGRIIAPAVAGEMQKQGITQQARVQPQLEALILLLLPAGAISALIPGASQVAGVLSM
TVAVVIAIRLIRWQMWRCGDRADLIGLAIGYGWLAIGTFALGFALFLEMATYVLLHFITV
GALGTLSASVILKSRLHQFKHLPQPKIMIVNILGLLFLATLFRVLAGAIVDSSPGLTGPN
LLWLSALSWSAAYLALAIFMLTTQTHFLKKQPSLKKASAGESVPAIKNAASVVTQSKRGQ
CHDSI