Protein Info for B158DRAFT_0925 in Kangiella aquimarina DSM 16071

Annotation: Hydrogenase/urease accessory protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 403 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details transmembrane" amino acids 220 to 242 (23 residues), see Phobius details amino acids 262 to 285 (24 residues), see Phobius details amino acids 291 to 308 (18 residues), see Phobius details amino acids 315 to 335 (21 residues), see Phobius details amino acids 346 to 367 (22 residues), see Phobius details amino acids 379 to 400 (22 residues), see Phobius details PF13795: HupE_UreJ_2" amino acids 216 to 376 (161 residues), 143.5 bits, see alignment E=2.3e-46

Best Hits

KEGG orthology group: None (inferred from 72% identity to kko:Kkor_2061)

Predicted SEED Role

"putative transmembrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (403 amino acids)

>B158DRAFT_0925 Hydrogenase/urease accessory protein (Kangiella aquimarina DSM 16071)
MNKVKTKKRFFLEPLSLLLILVLTSIALFHSTTGHAHQFSTAHAKLEPNGDNQYQGYIAV
SLLDLQQALSIDPDNDGRLKWQEVIDSMPVIDTYLTNHITFWQQPENTVTEKNISLVDKS
PAIACLVEWSNSPKLSELYGERLLQISFLISCPTTTETISYLSLKYGAFFDSLNDHKLLL
TWLYNDNERFFIIDSNQQKVDLKFVSSSVLDTISFYLYQGVIHIWLGLDHVLFVLALILP
FAWLRFRRGRFSSTQSLVLKDLIILITSFTLAHSITLTLTALNLLSIPSQWAEIGIAISV
AFTAINILTQWIKKLGVITFLFGLLHGMGFAGALSELGLSQTYKISSILAFNLGVEIGQI
AIIFLLFPMLSRLRKTQTLQYRLVPTLAVLIAIMGGYWVIERI