Protein Info for B158DRAFT_0908 in Kangiella aquimarina DSM 16071

Annotation: Uncharacterized protein conserved in bacteria containing a pentein-type domain

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 346 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF19420: DDAH_eukar" amino acids 50 to 342 (293 residues), 336 bits, see alignment E=9.8e-105

Best Hits

KEGG orthology group: None (inferred from 85% identity to kko:Kkor_2079)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (346 amino acids)

>B158DRAFT_0908 Uncharacterized protein conserved in bacteria containing a pentein-type domain (Kangiella aquimarina DSM 16071)
MFRELLINGLHLASLFFILQLSKQSGQKPIMTNNQNHTTHSVIMVPPTDFAYNEQTGADN
EFQNKPNQAQEHIREDALCEFNEMVNRLRDEHIEVLLLNKHAQSHQELPELPDAVFPNNW
FSTSSDGTLTLYPMKTPNRRAEVRPEELTQLLNRNGYQVHKTEHVDKNHQQILEGTGCIV
FDHKNQIAYAAISERCDKSLFDNFCQQRDYTPVSFNSVSSNGKPFYHTNVMMSIGEHFVV
ICLDSIKDEKQKQLLLDTFAKTKKEVIDISLEQTEKYFCGNILQLNNSKGDKIIVMSDNA
YQGFTKQQKAKLEKHGKLLPCSIPTIESVGGGSARCMLAENFLTKS