Protein Info for B158DRAFT_0900 in Kangiella aquimarina DSM 16071

Annotation: Outer membrane receptor proteins, mostly Fe transport

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 741 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF07715: Plug" amino acids 65 to 174 (110 residues), 80.8 bits, see alignment E=1.6e-26 PF00593: TonB_dep_Rec" amino acids 264 to 702 (439 residues), 148.9 bits, see alignment E=6.4e-47 PF14905: OMP_b-brl_3" amino acids 448 to 711 (264 residues), 32.4 bits, see alignment E=8.2e-12

Best Hits

KEGG orthology group: K02014, iron complex outermembrane recepter protein (inferred from 89% identity to kko:Kkor_2089)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (741 amino acids)

>B158DRAFT_0900 Outer membrane receptor proteins, mostly Fe transport (Kangiella aquimarina DSM 16071)
MTKRPFKRAGSKLYLATLLASTFALHPTVLLAAQSNSTDTSEQVSEQEDAEVITIVAHRQ
PRNISQVAGTVTIMDQDYIERNIALNIDDLVRYEPGIEVDDSSTRFGYGGFRIRGIGGNR
TVTVVDNVPIADNYSVGNFANSGRGLFELGLVSRVEVLRGPASTLYGSKALGGVVAMNLL
DASDILQGDSQGNWLKAGYNTDSDRYNLALASAFQQDDFSLLIAGAKQYGHEADVANLPS
GTTADEQNRTQYAGLIRAALDTDYGRFRLSLDGLEDERLTDINAVLGTGRLANTTSMIGD
DSRDQTRILLDHHFTNLGFVDQGTWRLWHQKSETEQDTFEERLLAPTPVSLVREFNYDHK
TSGIGADLETRIESGELTQRLGYGFEFSETELTELRNASQTNLDTDETTNIVLGEVFPLR
DFPKSTVRELGIYIHDEIELWRNGLVISPGLRYENYELKANNDPLFDSQFPDANKTNLTS
DAWLPKLGLLMPIGENMEWFSQYARGHRAPPFADVNIGLDIPMFNIRAISNPDLKSERGY
TFETGLRYRGSDTQAEFALFHNRYSDFIQSRAFVGFDAGTMIFQSINRDKVIIEGSEFRL
KHYFSDTISTDVKLEYIRGEDKNTGEPIAEVRPPMAVFELSYTPTSMSWETRLVATASRS
QKALFDARDTELFSAPGYTSYDWITRWFPADDLQLSLGIFNLTDKTYWRNSNVANYPAND
PTLPLLAEPGRSVAASLVWNF