Protein Info for B158DRAFT_0838 in Kangiella aquimarina DSM 16071

Annotation: Predicted Zn-dependent peptidases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 954 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF00675: Peptidase_M16" amino acids 59 to 174 (116 residues), 89.7 bits, see alignment E=1.8e-29 PF05193: Peptidase_M16_C" amino acids 213 to 391 (179 residues), 81.5 bits, see alignment E=7.1e-27 amino acids 689 to 867 (179 residues), 73.6 bits, see alignment E=2e-24

Best Hits

KEGG orthology group: K07263, zinc protease [EC: 3.4.24.-] (inferred from 76% identity to kko:Kkor_2156)

Predicted SEED Role

No annotation

Isozymes

Compare fitness of predicted isozymes for: 3.4.24.-

Use Curated BLAST to search for 3.4.24.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (954 amino acids)

>B158DRAFT_0838 Predicted Zn-dependent peptidases (Kangiella aquimarina DSM 16071)
MNSNISKIRAGLLLCCISLLISCQTLAPEKDNDRLPLSPEVTTGELRNGIRYYIHPNGKP
EERAYITLLLNVGSLQEEEHERGAAHFVEHMAFNGSTHFNKNALVTTLESLGMSFGSDIN
AFTSFDNTRYHLEIPTDNPDNWSTIALILDDWITGIKFEPEEVEKERKVILSEKRARKGL
GERLSEVLTPINFGDARHAKRMPIGIDETLNAMTADDLRAFYQKWYQPHNMALIITGDVD
PENTVKFFNNTIGQIKPSNSTKPQEYLIPAKQEPDFEIISDQEILSSSLNIRYQTHSVTL
NNFDALRYRLLNQIVVSLFNKRMYELAESAEKPFESAGLGYSQLGNDKLLFNFSVTPKDG
YFSQGYMRLIEEIKRVEQHGFLDTELDRYRKEVLNSSMLAVEDMDSMHSSHLTDKYMSHF
LYGEHYFSTIQRHVLLEVVLPTISTSEISAHFSQLISNPLHSTIVYAPVNEAPSADLKND
LYAELKKTRQVQPYQEAELDAPLMVALPEKGSIVEQSSIEAVEATKYQLSNGATVIIRPS
DLSNTEVLLAAYAPGGYSLANQQQQRSAMESAKLVASSGIASYTRTDLGKKLQDKTVQLN
LNIGRYYSQLSASSAPKDLELMFQLIHLYFTEPKIDPIVAQNYKESVMQYQRNRLNDPEQ
RYADELHLLITDNHPKSQPWSVEEAEQIDPKVALDFYKQRFSKANNFTFVITGNIKEEEI
KLLIEKYIASLPATDKTETWRDENIRTVERNIHFSRNTALDEKTKVNLQFHKPIEKYISE
TRFRLGLYEEILQQELQAKLREELGEVYSIGVNASIDRYPTEWFNLLISFNAEPGHEDNL
IEVIQQVIDKSLNEPLPQDKLDNIKQQRRMVFTEGQQSNQFWLGQIVLYERENIDYYYFT
HYMERLDAVTAKQIQDTANMLFKDSYLITSIMRPDDETDIVNKAEQKSEQAITD