Protein Info for B158DRAFT_0833 in Kangiella aquimarina DSM 16071

Annotation: undecaprenyl-diphosphatase UppP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 274 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details transmembrane" amino acids 40 to 59 (20 residues), see Phobius details amino acids 85 to 105 (21 residues), see Phobius details amino acids 115 to 133 (19 residues), see Phobius details amino acids 153 to 171 (19 residues), see Phobius details amino acids 191 to 211 (21 residues), see Phobius details amino acids 224 to 245 (22 residues), see Phobius details amino acids 253 to 273 (21 residues), see Phobius details PF02673: BacA" amino acids 6 to 266 (261 residues), 273 bits, see alignment E=1.5e-85 TIGR00753: undecaprenyl-diphosphatase UppP" amino acids 6 to 264 (259 residues), 225.9 bits, see alignment E=3.4e-71

Best Hits

Swiss-Prot: 58% identical to UPPP1_PSEHT: Undecaprenyl-diphosphatase 1 (uppP1) from Pseudoalteromonas haloplanktis (strain TAC 125)

KEGG orthology group: K06153, undecaprenyl-diphosphatase [EC: 3.6.1.27] (inferred from 98% identity to kko:Kkor_2161)

Predicted SEED Role

"Undecaprenyl-diphosphatase (EC 3.6.1.27)" (EC 3.6.1.27)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.1.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (274 amino acids)

>B158DRAFT_0833 undecaprenyl-diphosphatase UppP (Kangiella aquimarina DSM 16071)
MDWLQALFLALIQGLTEFLPISSSAHLILTSKVLQWQDQGLAFDVAVHVGTLTAVVVYFR
KEVAEMIGAWFKAVLGGQPTPNSRLAWAVIFGTIPVGLFGLFLEAFDIVDLYLRETYVIA
ITTIIFGLLLWYAERQYKGKPVEQFKDEYQLRWRDIFAIGGAQALALIPGTSRSGITMTA
AALLGFSRTAAARYSFLLSIPAIVLPGGLKGIQLAQEGAKFDWDFLILGIVVSALSAFAC
IHLFLKWLEKIGFMPFVWYRLILGVVLFAIVFMG