Protein Info for B158DRAFT_0782 in Kangiella aquimarina DSM 16071

Annotation: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 399 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details TIGR00521: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase" amino acids 3 to 394 (392 residues), 470.3 bits, see alignment E=2.6e-145 PF02441: Flavoprotein" amino acids 6 to 179 (174 residues), 127.7 bits, see alignment E=3.4e-41 PF04127: DFP" amino acids 185 to 366 (182 residues), 239.2 bits, see alignment E=3e-75

Best Hits

Swiss-Prot: 59% identical to COABC_VIBPA: Coenzyme A biosynthesis bifunctional protein CoaBC (coaBC) from Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)

KEGG orthology group: K13038, phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC: 4.1.1.36 6.3.2.5] (inferred from 90% identity to kko:Kkor_2221)

MetaCyc: 56% identical to fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase (Escherichia coli K-12 substr. MG1655)
Phosphopantothenate--cysteine ligase. [EC: 6.3.2.5]; Phosphopantothenoylcysteine decarboxylase. [EC: 6.3.2.5, 4.1.1.36]

Predicted SEED Role

"Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)" in subsystem Coenzyme A Biosynthesis (EC 4.1.1.36, EC 6.3.2.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.1.1.36 or 6.3.2.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (399 amino acids)

>B158DRAFT_0782 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (Kangiella aquimarina DSM 16071)
MKLQGKKVLLGITGGIAAYKSAELCRNLKKAGAEVRVVMTKGAQAFITPLTLQALSGNPV
HHDLLDPNAEAAMGHIELARWSDFVVVAPASADFMARLNAGMADDLLTTLCLATASPIAV
APAMNQQMWANPATQHNVQQLMLKGIEIWGPDEGDQACGDVGPGRMLEPSDLLNRIDDHF
NDKPLKGQHWLITAGPTVEPIDPVRYLANRSSGKMGFAIAEAAARAGAEVTLVTGPVNLT
VSGSIKRIDVQTAQQMFEAVQSQFKGVDTFVACAAVSDYRPKVAAQQKLKKQSDDGLTIE
LTQNPDILRWAAEQNTAFCVGFAAETNNIEEYAEAKMTKKGINVICANDVSRKDIGFSSD
NNEVSVYYKKDGALQVQQLGPALKSVIAHQLVNFLPGIK