Protein Info for B158DRAFT_0749 in Kangiella aquimarina DSM 16071

Annotation: Cell division protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 186 transmembrane" amino acids 30 to 53 (24 residues), see Phobius details PF05036: SPOR" amino acids 116 to 183 (68 residues), 61.3 bits, see alignment E=4.4e-21

Best Hits

KEGG orthology group: None (inferred from 77% identity to kko:Kkor_2254)

Predicted SEED Role

"Cell division protein FtsN" in subsystem Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (186 amino acids)

>B158DRAFT_0749 Cell division protein (Kangiella aquimarina DSM 16071)
MTKDYAKKRKTARKSNKRSPRQNTPSRKPLSPVLVFIGGVLITLFAVFLWVLVKKPEMIK
EVIPVKEQAEKVDSKTTQTSESAENETSEPKFTYHETLTNKEIKVDATRVTNTDSNKTYI
MQCGAFRKQDDAESMKVEMAFIGFQANVEEKDGWYRVRLGPYNSKRAAESDRHKLQDNNY
QDCRIW