Protein Info for B158DRAFT_0579 in Kangiella aquimarina DSM 16071

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 823 PF10070: DabA" amino acids 19 to 792 (774 residues), 870.7 bits, see alignment E=5.3e-266

Best Hits

Predicted SEED Role

"Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase chain 5 homolog" in subsystem CO2 uptake, carboxysome or Respiratory Complex I

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (823 amino acids)

>B158DRAFT_0579 Uncharacterized protein conserved in bacteria (Kangiella aquimarina DSM 16071)
MNNLQQKSASFERELDEAIEIATSSIAPNWPLDKMIAVNPYWTHLEHSFSETAHHLATLA
GSPMAMPLFYYQKRWSEGSISKAHLQQAAQDLNTDLTIEQLVEALNGDDQLLTPVPLLCD
TLDSQRDLQHKPAWCDAITHQVAQFCAAYFDKDQSDWNPSDPAPLYASWCHTLSDDHSIS
LLMQASRIPKAAKQLEENPRKQIQIALNKLDIPKQNWADYLQAVMYRISGWAAWCAYLKW
QAQLQGNDDDNLLQLLAIRLTWEALIDDGKREEGSIWHLWQTQWQSHFEHYNPQQTITKL
VWQRAHEISYQQELAQTLKQSSVSDNQQSESVKVQAAFCIDVRSEVFRRHLESQSDDIET
IGFAGFFGLPVSYTPLGTDAARPQLPGLLAPQMVVTDTSGTASVDESISQQRQTTLRSLS
SWKSFLSLPGSAFNMVESLGISYVNTLLNRSRARNTHSTKPALGLNQRQAQQLRPRLQAD
LSQRIALAEGVLQGMGLTQRIAPLVLLVGHGSQTANNPQKSGLDCGACCGQTGEVNARAL
AGILNDPEVRKGLHAKGVKLPEGTRFIAALHNTTTDQVNLFDADNLSAEAEGVLPALNDA
LSEAGKACRAERAPALGLGKLAQKPAALQKAVVKRANDWAQTRPEWGLANNACFIVGKRS
LTRNLNLEGRAFLHEYDASQDTDASLLTQIMTAPMVVINWINMQYFASTVDNHRYGSGNK
TLHNVVGGRIGVFEGNGGDLRIGLAIQSVHDGEQWRHEPLRTTVVIDAPQEHIEKVINEQ
PVVASLINNQWMHLARIEQGKLYFYNQGSWQIQSLSDADSQAN