Protein Info for B158DRAFT_0183 in Kangiella aquimarina DSM 16071

Annotation: Chemotaxis protein histidine kinase and related kinases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2224 PF01627: Hpt" amino acids 10 to 91 (82 residues), 24.7 bits, see alignment (E = 5.7e-09) amino acids 600 to 690 (91 residues), 51.7 bits, see alignment (E = 2.1e-17) amino acids 744 to 833 (90 residues), 26.7 bits, see alignment (E = 1.3e-09) amino acids 1272 to 1355 (84 residues), 48.8 bits, see alignment (E = 1.7e-16) amino acids 1457 to 1557 (101 residues), 38.5 bits, see alignment 2.8e-13 PF02895: H-kinase_dim" amino acids 1622 to 1677 (56 residues), 23.5 bits, see alignment (E = 1.5e-08) PF02518: HATPase_c" amino acids 1806 to 1942 (137 residues), 67.6 bits, see alignment 3.2e-22 PF01584: CheW" amino acids 1947 to 2080 (134 residues), 69.9 bits, see alignment 4.4e-23 PF00072: Response_reg" amino acids 2105 to 2216 (112 residues), 90.3 bits, see alignment 2.4e-29

Best Hits

Predicted SEED Role

"Signal transduction histidine kinase CheA (EC 2.7.3.-)" in subsystem Bacterial Chemotaxis or Flagellar motility or Two-component regulatory systems in Campylobacter (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (2224 amino acids)

>B158DRAFT_0183 Chemotaxis protein histidine kinase and related kinases (Kangiella aquimarina DSM 16071)
MKDNQTKVALNWVKDEIESTLEQAQNAIKAYAEDETDKTQIHFCANCMHQIRGTMQMLEF
SGAALLAEEMEALAEAIGEKNVASNEKAYEVFLSAILRFRSYLSRYAEGKSDLPVILLPA
INDMRACRNVDSLGAGNLISIPTEGIEAPAPKQKVDLKGDILAEVKSLRSKFQQGLLGVI
RDVDTQNNLERMQQVTQTLWGLGNRVPYQNLWWVTTVFLKNIALLSKKDKPVVKGLLGQV
DRRIRELIEKTANEEEANKVLINVLFYVAQFDTEDEQVKEVQDKFQLNQLMDTLGDLESE
SSDLTGPDTESVRIALNVIKEDLGEIKESLDLYIRTKSQESEPLEDMVPAMQKISDTMSM
LGLTQSKDMISKQMKSIGNLLDGSEADREQGLVYIAEGILSLEDYIERALKMDSKQLANE
SLGQGEGESLQIINARYQLVQESRGNLHKVKDAITDYLDESHNIKRLEQVPELLKEVEGA
LTFAQLDNLLDVISKAKNFVVKYLISEKVVLSEAEISTLADAISSVDYYLEGLMSSGLHG
LPVILQRAVDSIGELEAHYGSLDEELLPVLDDALEMPEIEMVESETYDESDDSDELIDDE
VREIFIEEADEVLEEMHSLLPEWKQDQTNKEAISTIRRNFHTLKGSGRMVGATDIGELSW
AIENMLNRLIDHSIEYTPALFVTTEEVANTLPEMVKQFASGEKTKFPKELADRANRISKG
EMITDLQPQQEQTEEESDQAAEQELFDIFKQEAEGHVTSLEMFANQRQQGITQSQISDNL
LRSLHTLKGVAHIANIQSLTNVIVPVESYFQELKTRELLAEEADMSLIDHTKDLLRHIIS
TPEDDQVISAHEDEILQQLAQQQKRFDESGETGQEQGRDPELIKDIFNIASDVLVDIEST
NLQETPEPQRLERISYLMASVERLKSILSEAELNEIEQVVAALSDALQRNMTANKVDTSI
GTLLQEAYNQLENQFDCLAANLSIPEARDLVQALQTWKPAETTGLELESAPEEISLGESE
EVQFEETPEESVQVPTTEEKEEQRATQDDNSIEFNLDDFTPPSKTEEKPAAETKDRETSK
DDNSLEFTLEDDFLTKESEEVQEEKSEEKKEEKATTDDNSVEFEFSDEFLASEAMEEESV
TDEHEEAEDLSLEDAAEELGLDLSDELDLSEELAADEKEEAPEETAQEEVYESELPEETV
KEEPEVTAEITEETTAETEESVSDTANEAAEQVEDLDEVPTEEETAEVSEEAPVPEKEIA
KTISLDLDVDDELLEIFSEEAEELFDSDANLLQKWRQEPNNLKIIAELQRNLHTLKGSAR
MAGFSPIGDLAHGLEDLYTAITDQLFASSEEAIDLAERAEDKLLAIFNARNTPEKIPSPA
AMLDEIEGFIAAQKAGRAYVRPQSEADIAPAAEEVKPSEPEKAEETTPVAETQQPAEPEE
IESKEEIDTEEAAWNEELAELFLGEASELLTSYEEAIERWSNDLHNVEPLNTAMRNLHTL
KSGAKLAAITPVGELTHKLEGVVEALARDPRLGHARWADMLRRSYDELHEMVDQVRNGQM
PAKPAELLRKLENDKATIESQLEQLDKRDLAESGEQAEVKIVSLADRQKQKEEEAKEAAN
RDVIRVRSEVLDNLVNLSGEASIFRSRLEQQVADLNFNLGEMSSTVDRLREQLRNLEIET
EAQVLYRREISGVDFDEFDPLEMDRYTRQQELTRSLLEAASDLMSIQETLETKVGDAEAT
LLAQGRVNTELQDRLMRTRMVPFNSIESRLRRMVRQISTELNKDVDLILESEGEMDRTVI
ERMVAPLDHMLRNAIDHGIESKDERKKAGKAEKGTVHLSLSRRGNEVYIQIQDDGAGIRK
DKVRKRAISQGMIDESYNPTDRELFRLILQPGFSTAETVTQISGRGVGMDVVHSEILQLG
GSLNISSEEGKGTTMTVRLPFTLSSNQALMVKVKGEPYAIPLSNITTVARVSAKEVLEIY
QDKDKTFTHLGEEYELRYLGQILDRNSDIVPPVDEFVPVLIIQGEDKPIAVHVDELIGSR
EIVVKNIGRQISTVPGISGASILGDGSVVLILDMQTLVDRFHEWDFSHEAGMVQETTVED
RIPVVMVVDDSITVRKVTARLLQRHQFQVMTAKDGVDAITQLHDDIPDVMLLDIEMPRMD
GFELATIIRHDERLKHLPIIMITSRTGEKHRERAEQIGVNRYLGKPYNEETLLGTIDEML
KLED