Protein Info for B158DRAFT_0177 in Kangiella aquimarina DSM 16071

Annotation: methionine adenosyltransferase (EC 2.5.1.6)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 386 TIGR01034: methionine adenosyltransferase" amino acids 6 to 383 (378 residues), 640.2 bits, see alignment E=5.1e-197 PF00438: S-AdoMet_synt_N" amino acids 6 to 102 (97 residues), 149.4 bits, see alignment E=5.5e-48 PF02772: S-AdoMet_synt_M" amino acids 116 to 232 (117 residues), 163.9 bits, see alignment E=2.5e-52 PF02773: S-AdoMet_synt_C" amino acids 234 to 373 (140 residues), 232.3 bits, see alignment E=2.4e-73

Best Hits

Swiss-Prot: 81% identical to METK_SHESW: S-adenosylmethionine synthase (metK) from Shewanella sp. (strain W3-18-1)

KEGG orthology group: K00789, S-adenosylmethionine synthetase [EC: 2.5.1.6] (inferred from 96% identity to kko:Kkor_0237)

MetaCyc: 80% identical to methionine adenosyltransferase (Escherichia coli K-12 substr. MG1655)
Methionine adenosyltransferase. [EC: 2.5.1.6]

Predicted SEED Role

"S-adenosylmethionine synthetase (EC 2.5.1.6)" in subsystem Methionine Biosynthesis or Methionine Degradation or Quorum Sensing: Autoinducer-2 Synthesis (EC 2.5.1.6)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.5.1.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (386 amino acids)

>B158DRAFT_0177 methionine adenosyltransferase (EC 2.5.1.6) (Kangiella aquimarina DSM 16071)
MSNYSVFTSESVSEGHPDKIADQISDAVLDAILAQDINARVAVETMVKTGMVIVAGEVAT
SAWVDIEELARNTIKQIGYNSSEMGFDWESCAVLNAIGKQSPDIAQGVDRDDPEAQGAGD
QGLMFGYASNETDVLMPAPITYSHRLVQKQAELRKNGKLAWLRPDAKSQLTFRYENDKPV
GIDAVVLSTQHDPEISQKDLQEAVIEEIIKPVLPAEWISDKTKYFVNPTGKFVIGGPMGD
CGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADRCEIQV
SYAIGVAEPTSISVNTFGTGKVSEDKLVELVREHFDLRPRGLTKMLNLLQPIYQATAAYG
HFGRTEDSFTWERTDKAEALRAAAGL