Protein Info for B158DRAFT_0177 in Kangiella aquimarina DSM 16071
Annotation: methionine adenosyltransferase (EC 2.5.1.6)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 81% identical to METK_SHESW: S-adenosylmethionine synthase (metK) from Shewanella sp. (strain W3-18-1)
KEGG orthology group: K00789, S-adenosylmethionine synthetase [EC: 2.5.1.6] (inferred from 96% identity to kko:Kkor_0237)MetaCyc: 80% identical to methionine adenosyltransferase (Escherichia coli K-12 substr. MG1655)
Methionine adenosyltransferase. [EC: 2.5.1.6]
Predicted SEED Role
"S-adenosylmethionine synthetase (EC 2.5.1.6)" in subsystem Methionine Biosynthesis or Methionine Degradation or Quorum Sensing: Autoinducer-2 Synthesis (EC 2.5.1.6)
MetaCyc Pathways
- aspartate superpathway (20/25 steps found)
- superpathway of L-cysteine biosynthesis (mammalian) (4/5 steps found)
- S-adenosyl-L-methionine biosynthesis (1/1 steps found)
- S-adenosyl-L-methionine salvage II (2/3 steps found)
- L-methionine degradation I (to L-homocysteine) (2/3 steps found)
- superpathway of S-adenosyl-L-methionine biosynthesis (6/9 steps found)
- ethene biosynthesis I (plants) (1/3 steps found)
- 2'-deoxymugineic acid phytosiderophore biosynthesis (1/4 steps found)
- S-adenosyl-L-methionine salvage I (1/4 steps found)
- L-cysteine biosynthesis VI (reverse transsulfuration) (3/7 steps found)
- L-methionine salvage cycle III (4/11 steps found)
- superpathway of L-methionine salvage and degradation (7/16 steps found)
- L-methionine salvage cycle I (bacteria and plants) (3/12 steps found)
- L-methionine salvage cycle II (plants) (1/11 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.5.1.6
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (386 amino acids)
>B158DRAFT_0177 methionine adenosyltransferase (EC 2.5.1.6) (Kangiella aquimarina DSM 16071) MSNYSVFTSESVSEGHPDKIADQISDAVLDAILAQDINARVAVETMVKTGMVIVAGEVAT SAWVDIEELARNTIKQIGYNSSEMGFDWESCAVLNAIGKQSPDIAQGVDRDDPEAQGAGD QGLMFGYASNETDVLMPAPITYSHRLVQKQAELRKNGKLAWLRPDAKSQLTFRYENDKPV GIDAVVLSTQHDPEISQKDLQEAVIEEIIKPVLPAEWISDKTKYFVNPTGKFVIGGPMGD CGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADRCEIQV SYAIGVAEPTSISVNTFGTGKVSEDKLVELVREHFDLRPRGLTKMLNLLQPIYQATAAYG HFGRTEDSFTWERTDKAEALRAAAGL