Protein Info for B158DRAFT_0118 in Kangiella aquimarina DSM 16071

Annotation: NADH dehydrogenase subunit J (EC 1.6.5.3)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00499: Oxidored_q3
  • amino acids 18 to 165 (148 residues), 135.6 bits, E=5.4e-44

Best Hits

KEGG orthology group: K00339, NADH dehydrogenase I subunit J [EC: 1.6.5.3] (inferred from 86% identity to kko:Kkor_0298)

Predicted SEED Role

"NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)" in subsystem Respiratory Complex I (EC 1.6.5.3)

MetaCyc Pathways

• aerobic respiration III (alternative oxidase pathway) (3/3 steps found)
• aerobic respiration I (cytochrome c) (3/4 steps found)
• NADH to cytochrome bd oxidase electron transfer I (1/2 steps found)
• NADH to cytochrome bo oxidase electron transfer I (1/2 steps found)
• Fe(II) oxidation (3/6 steps found)
• NAD(P)/NADPH interconversion (2/6 steps found)

KEGG Metabolic Maps

• Oxidative phosphorylation

Isozymes

Compare fitness of predicted isozymes for: 1.6.5.3

Use Curated BLAST to search for 1.6.5.3

Protein Sequence (226 amino acids)

>B158DRAFT_0118 NADH dehydrogenase subunit J (EC 1.6.5.3) (Kangiella aquimarina DSM 16071)
MTVEQIVFYVFATLTIVSALGVVTVRNSVQAVLCLVLTFFSAAVLWMLLEAEFLAVALVL
VYVGAVMVLFLFVVMMLDVDFASLKQGFTRYVPLGILIAIGLLIGLYWVLRGELFGLEAM
PEPAKHAADYSNVESLGMLLYTDYFYAFEIAGVILLVSIVAAISLTFRGRRERRGQSVPS
QHRASKDERLHIIKMDAEVAQDDESETDDLEKAVGEKSGRTKGESS