Protein Info for Atu6067 in Agrobacterium fabrum C58

Annotation: conserved hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 189 TIGR01926: uncharacterized peroxidase-related enzyme" amino acids 14 to 186 (173 residues), 147.6 bits, see alignment E=3.3e-47 PF02627: CMD" amino acids 48 to 97 (50 residues), 41.1 bits, see alignment E=7.2e-15 TIGR00778: alkylhydroperoxidase AhpD family core domain" amino acids 70 to 96 (27 residues), 29.2 bits, see alignment 4.8e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to ara:Arad_14221)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z2PJS0 at UniProt or InterPro

Protein Sequence (189 amino acids)

>Atu6067 conserved hypothetical protein (Agrobacterium fabrum C58)
MTTIDGLARSQRISRLRIPDESELPEDIQALVDRHHHENWVRALSLNPDTARRFTGHFEH
LFAATGRRLPLQDRELIAVVVSATNGCGVCEIHHTRAFGDLLNDPGFARRVALDYHLADL
SKRQRALADLAVKVTLSPKTISQADFEKLRDLELSDEELLEAVETASWFNHTNRVTISLG
ILPDDKFFS