Protein Info for Atu4892 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 697 transmembrane" amino acids 463 to 478 (16 residues), see Phobius details PF02384: N6_Mtase" amino acids 19 to 259 (241 residues), 25.1 bits, see alignment E=5.4e-10

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu4892)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q7CW51 at UniProt or InterPro

Protein Sequence (697 amino acids)

>Atu4892 hypothetical protein (Agrobacterium fabrum C58)
MVSAAFRGLNAQGISAAARILDPAAGAGVFLLAAFRELVAARWRSEGHRPDTAALREILY
KQVRGFDINEAALRFCALGLYLLSIELDPNPKPVDKLHFDDLRGVVLHRPVDTTDVDRPE
AKQLGSLGSLIGEEHDGQYDLVIGNPPWASATGLEDWNLLLTEVHKIARSRLGDGITAPP
LPNAVLDLPFVWRAMRWAKPDAQIIFALHARFLFQQGDGMPLARQSLLEAMDVTSIINGS
ELRQTKVWPSISAPFCLLFAVNRPAHTASGFRMLTPRYEKGFNNAGVMRVDATNAYVVRP
QDLRERPETLKILFRGSEADLSLIDRVRRGNFTTLGRYWRELGDGGLANGNGYQKLRDSS
KKHDDGTIGDDATHLHGLPHLDDVSSATLVIDPSQLPVFDTDRVHRARDRAIYNGPILLV
HKSPPAKLQRIQMSVCDQDIVFNESWYGFSSKGAAEASLLTRYLALVLGSRVALWISLIT
SGEFGFEREVVEKSILEEVAIPPFESLAQDRVREVTNLFARLEKEGGDVWPDVDAWVAKL
YGLGERDLTVIDDTLRFNLPYASNRELAQSEPLIHQIKTYCRTLETELTRFAQRFKCTVR
VDYIPDRQSSPWQALRIVACWNTEAEDQTVDSIADIRALTAVADRTSATEIVIDEGKHSL
AIMLLAQSRYWSETQARLAAQRIIWTRPEFFRESPAV