Protein Info for Atu4786 in Agrobacterium fabrum C58
Annotation: iron ABC transporter ATPase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to FBPC_AGRFC: Fe(3+) ions import ATP-binding protein FbpC (fbpC) from Agrobacterium fabrum (strain C58 / ATCC 33970)
KEGG orthology group: K02010, iron(III) transport system ATP-binding protein [EC: 3.6.3.30] (inferred from 100% identity to atu:Atu4786)Predicted SEED Role
"Ferric cations import ATP-binding protein fbpC (EC 3.6.3.30)" (EC 3.6.3.30)
Isozymes
Compare fitness of predicted isozymes for: 3.6.3.30
Use Curated BLAST to search for 3.6.3.30
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q8U6M1 at UniProt or InterPro
Protein Sequence (353 amino acids)
>Atu4786 iron ABC transporter ATPase (Agrobacterium fabrum C58) MITVKPGSVVFENVRKTFGAFTAIPDLSLTIEPGTLVTLLGPSGCGKTTTLRMLAGLEHP NSGRILIGGKDVTMLPANERDVSMVFQSYALFPHMSALDNVAYGLQSSGLKKAEAREKAE EGLKLVGLAGMGHRLPAELSGGQQQRVAVARALVLEPQVLLLDEPLSNLDARLRRRVRTD IRELQQRIGFTAVYVTHDQDEALAVSDRIIVMKEGEIAQSGAPRELYEAPASSFIADFMG EANVVPCEVVSQTGDESLVRVGTMEHRVRSRGPRSGSAKLAVRPGAITIGAAGGSGMPGR VLHTAYLGGHIEYEVETEVGTLFIIDHEMNHTQRETSDVTLNFKNRGIALIDA