Protein Info for Atu4400 in Agrobacterium fabrum C58

Annotation: ferrienterobactin-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 717 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF07715: Plug" amino acids 58 to 168 (111 residues), 44.7 bits, see alignment E=1.7e-15 PF00593: TonB_dep_Rec" amino acids 264 to 679 (416 residues), 158.8 bits, see alignment E=4.2e-50

Best Hits

KEGG orthology group: K02014, iron complex outermembrane recepter protein (inferred from 100% identity to atu:Atu4400)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CGK7 at UniProt or InterPro

Protein Sequence (717 amino acids)

>Atu4400 ferrienterobactin-like protein (Agrobacterium fabrum C58)
MRGLKAGFFTITTGLMAGVSGVALAQSATPGSTTVLERITVEGSRWADGVEQARKRLNAI
PGGVSALQPQDRTLTAVPTLADALASAPGVVVQRFFGGNDQPRIQIRGSGLQQNPVERGV
LVLKDGLPINRADGSYIVGLANPGQASLIEIYRGYTANRLGASVLGGAINFASPVEKGTS
ISAGGGSFGQADASLRTGFDADRFAAGFYADASRRDGYRVYNESRRLSVGGVIEADVSDT
VKTRVFASYTDLGFDVAGPLTKSAMDADPRQVSPGPPISLGPNVTRDKPRREASQFVIGS
RSSIELGDHLFDIGLGYTYTRDMFRFPVSSGVRRTDGGDVTGLLRYAYQPDADALLPLFE
ASALYTVGSAERTYHINRAGGDGPAFSSNDLDASTLSLNVGLNVPLSETLTLSPSLSYTH
ATRDNEDLWRAAGRPRLSFGPGGAVASSVAAVDTSYERSYSGWSPALGISWRPGDSDMLF
AAVSRSFEPPTHDDLLGTTGGTPNASPTGFSTPDLKAQTATTVEIGWRGERGSWNIDATA
YYSWVENELLSLRDSSGSLLSAFNADETVHAGLEFGVSGEVLDGLTARLAYVLQDFLFRD
DPVRGDNRLAGAPRQVVNLAVQYALFEQWDIGAVLQWVPSKTPVDNMNTLYADPYAVVDL
RTEYRVNDRFSVYGAVTNVFDKTYASSTLILDEASAGQAVYLPGDGRGFYAGIKARF