Protein Info for Atu4020 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 548 transmembrane" amino acids 14 to 32 (19 residues), see Phobius details amino acids 46 to 69 (24 residues), see Phobius details amino acids 77 to 93 (17 residues), see Phobius details amino acids 124 to 142 (19 residues), see Phobius details amino acids 153 to 173 (21 residues), see Phobius details PF08019: EptA_B_N" amino acids 59 to 207 (149 residues), 156.6 bits, see alignment E=4.7e-50 PF00884: Sulfatase" amino acids 238 to 526 (289 residues), 224.9 bits, see alignment E=1.5e-70

Best Hits

KEGG orthology group: K03760, phosphoethanolamine transferase (inferred from 100% identity to atu:Atu4020)

Predicted SEED Role

"Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A" in subsystem Lipid A modifications

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CFY6 at UniProt or InterPro

Protein Sequence (548 amino acids)

>Atu4020 hypothetical protein (Agrobacterium fabrum C58)
MTSKATGTTTFRPEIGSVALSLLTAAYLLLFTNRTFWSKVHTYLSAYPVAIAALYFAMAA
FFGALIIIFSAKYLIKPFLILLVFAAAAASWFMDRYGIVIDSDMIRNAMETTQAEAGNLI
TPGFLWHMAIYGLVPSILIVAVRIRHRPILDKLLWNTISILVCLAIAGIISFANSKTLTT
AIRQHKDIVKSVNPLSPMISTIHYFTQAGQEAEIQVSPVGTDAKLMPALGGVRKPRITVI
VAGETARAANFSLNGYGRDTNPELAKRDVIYFPNTTSCGTATAISIPCMFSKFTRSQYSH
SKALANENLMDVLVHAGVGATWLDNNTGSKNVADRIPYFDLPSTNDSRFCTGGECRDDIF
FDKLDAWLDNVKKDSVIVLHQMGSHGPTYYLRYTDEFRKFTPDCRTAELGNCSDAEIVNS
YDNTLLYTDHFLSTVIDKLKARSDKLATGMIYASDHGESLGENGVYLHGAPYLLAPDQQT
HVPFLVWFDDDFATSMGLDKACLAKSAAEGGRSHDNYFHSILGMMSVSTSVYDPSLDVFS
GCTRRQTS