Protein Info for Atu3763 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 587 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details PF05951: Peptidase_M15_2" amino acids 15 to 166 (152 residues), 255.5 bits, see alignment E=1.4e-80 PF08291: Peptidase_M15_3" amino acids 80 to 159 (80 residues), 30 bits, see alignment E=5e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu3763)

Predicted SEED Role

"protein of unknown function DUF882"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q7CT90 at UniProt or InterPro

Protein Sequence (587 amino acids)

>Atu3763 hypothetical protein (Agrobacterium fabrum C58)
MLAAMPFVGVSATEAAAETRSLKLYYIHTREKAVITFKRNGKYDQKGLQELNRFLRDWRR
NQPTRMDPRLFDLVWEVYRRSGATDYINVVSAFRSPETNGLLRTRTKGVAEKSQHMLGKA
MDFYIPGVKLATLREIGMQMQIGGVGFYPTSGSPFVHMDVGGVRAWPRMSRQELVRIFPK
GNTLHVPSDGKPLPGYEQALADYKKRVSSSSIQVASSAGSGPASSGGGGKRKTLLQALFG
GGDEDEDPDSIAAPEPAERPAVARPAPQQAAPEPEPTIAVASAQALPGVNDAPLPTARPA
FGNQPPANAGLATALYSPARNAAQDALQAATMPTPTSAPAERQQFADLAEVSVPVPTLLG
PRGMKGDAEGSILTASADGATPAATGELASIPVPANRPAVAEALLAAANTDQEGEDDLAE
AQQDTLSPTVVAALEQSGQAARSQVQSAAMPTAAPFPAAVNHKVTVAPAETAKAAPQPGF
GDAFDLKPAINGGLSAGLPTKGSRPSKQDAVVSEQAMVGGGRLTQDLISDWALNQNKGTT
GRSVKAPRVVANRMLSKEMSASATSASFKPGAVAIESSRFSTPVKMH