Protein Info for Atu3695 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1818 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF00024: PAN_1" amino acids 33 to 83 (51 residues), 30.3 bits, see alignment (E = 1.8e-10) PF21142: A2M_bMG2" amino acids 363 to 463 (101 residues), 54.1 bits, see alignment 9e-18 PF11974: bMG3" amino acids 486 to 587 (102 residues), 98.9 bits, see alignment 8.7e-32 PF01835: MG2" amino acids 593 to 688 (96 residues), 82 bits, see alignment 2.1e-26 PF17972: bMG5" amino acids 694 to 819 (126 residues), 126.3 bits, see alignment 5.9e-40 PF17962: bMG6" amino acids 827 to 937 (111 residues), 110.1 bits, see alignment 4.2e-35 PF07703: A2M_BRD" amino acids 950 to 1094 (145 residues), 82 bits, see alignment E=3.2e-26 PF00207: A2M" amino acids 1162 to 1237 (76 residues), 28.1 bits, see alignment (E = 9.3e-10) PF07678: TED_complement" amino acids 1358 to 1461 (104 residues), 37.2 bits, see alignment 1.1e-12 PF17973: bMG10" amino acids 1673 to 1801 (129 residues), 83.9 bits, see alignment 6.5e-27

Best Hits

KEGG orthology group: K06894, (no description) (inferred from 100% identity to atu:Atu3695)

Predicted SEED Role

"PAN domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q7CT39 at UniProt or InterPro

Protein Sequence (1818 amino acids)

>Atu3695 hypothetical protein (Agrobacterium fabrum C58)
MSLRALVRVSLVAVSTAFIFLPATAAEPSRKVVTTQNGDYFGFDLRTEQNVSLEQCGEIC
VGDAACKAFTYNPKVKWCFLKSDFNQLNAFPGAVAGKIVEVATEADIGAPQRLSFVTDSL
QQEARRLKSGLAANDGETGQGVEALVETARQQVASGNIPDAVATYKAALAITPEDGALWA
ELSEKAAQVTDNYSIAGQAASAAINAYQLSRTVSARTEALNRLAKAFERTQNYRAALNAY
KESLALTDDAQTKAAYADLRTRQGFRVINNTVDTDSVSPRACVQFSEPLVKNGVDYSSFI
TLDGAAPKAIEAKGSEICVEGLTHGQRYKIAFRAGLPSSVEEPLEKQVNLDIYVRDRAAT
VRFTGENFVLPGTARRGIPIVSVNADKADLKLYRVGDRNITSLLSNSQFLTQMDGYNADR
IENEIGELVWQGSIEIKPDLNKDVVTSFPVDEALPERKPGIYVLTAVPPGVAPETWDSRA
TQWFLVSDTGITTYAGTDGLNVFVRALGSAKPLADVDLQLLAKNNEVLGTAKTDADGRAV
FSAGLMRGTAAQAPAILTARNGDKDYVFLDMTRAGFDLSDRGVTGRAAPGAIDVFSWTER
GIYRAGETVHAAALARDVDGKAIEDLPLTFIFSRPDGVEDRRFVSDGKALGGHAVDLPLQ
ANAMRGTWTLRIHTDPKTAAISEKSFLVDDFVPDRTEFDLSSKAKQIDPGAETAIDVDGR
YLYGAPAAGLTLEGEIAIKPTRTTTDFEGYFFGLADEESEEENRTTLADLPVLDEEGKAS
FNVDLTDLPSTTQLLSANITVRMQEAGGRAVERSLTLPIKAEAPVIGIKPQFSGDLAQNS
VGRFHIIGVSADGAKQAMNGLTWKLIKVERNYQWYRQGNSWRYEPVEYTKQQETGTLSVD
ANGGEISVPVTWGRYRLEVEGAGNGAPVSSVEFDAGFYVEASSTETPDALEIALDKQSYK
IGDTAKLKVSSRFAGELMVTSGSEKLISVQNAEIGADGGEIGIPVTEEWGAGAYVTATLF
RPGDAQESRMPMRAIGIKWLAVDPAERKLAVTLGAPQKTLPRQPLEIPITVAGAGVGEKA
YAIVAAVDVGILNLTRYEPPKPDEWYFGQRRLGLEIRDLYGRLIDGSLGATGRLRTGGDG
AGAALQGSPPTEKLVAFFAGPVELDRDGKATISFDIPQFNGTARIMAVAWTKTGVGHAVS
DAIIRDPVVVIASAPKFLAPGDVSQLRLDIANTDGEAGDYRLDVTSNTALTVDQGEMSQT
LALQKGGKSSLTVPLTGEQPGNGAITIKVSNASGVSLEQVLNVPVRPAVLPVTTRREIKI
APNSSLTINGDLLADSMLLGSSVAVNVTRSPAFDIPALVMMLDKYPYGCAEQTTSRALPL
LYVSELTKDSGMAEDPDTRKRVQEAIYRVLSFQSSSGSFGLWSPGYGDLWLDAYITDFLT
RAREQSYDVPEAAMVQALNNLQNGLSYDSNVKDRGNEIAYSLYVLARNRKAAINDLRYYA
DTALADFPTPLAKAQVAAALSLYGDQARSKSVFGASLDMASRATNVSLARADYGSALRDG
AATLALAAESRPVPAVVPQLAGAVAKEWEKKPYTSTQEQAWMLLAARAVKGEDKDIRLDV
NGDLQTGGFGKRMSGDELLAAPLKIANASADPVTAVVTTVAPPAQPLAAGGEGFTITRTY
YSMDGEEVNPSEVTQNERYVVVLNVVPQNNWQSRILVTDLLPSGFEIDNPSLVNSAELSN
FDWLPETEAAHTEFRYDRFVAAFDRSAGDSSEIALAYVVRAVTPGTYDHPAASVEDMYRP
QFAARTATGRMEVRSATP