Protein Info for Atu3676 in Agrobacterium fabrum C58

Annotation: siderophore biosynthesis protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 298 PF05175: MTS" amino acids 27 to 143 (117 residues), 23.7 bits, see alignment E=1.4e-08 PF13489: Methyltransf_23" amino acids 35 to 146 (112 residues), 54.1 bits, see alignment E=6.1e-18 PF07021: MetW" amino acids 37 to 124 (88 residues), 22.6 bits, see alignment E=2.9e-08 PF01209: Ubie_methyltran" amino acids 45 to 142 (98 residues), 29.7 bits, see alignment E=1.7e-10 PF13847: Methyltransf_31" amino acids 46 to 147 (102 residues), 58.1 bits, see alignment E=3.5e-19 PF13649: Methyltransf_25" amino acids 49 to 140 (92 residues), 77.3 bits, see alignment E=4.9e-25 PF08242: Methyltransf_12" amino acids 50 to 142 (93 residues), 46.9 bits, see alignment E=1.5e-15 PF08241: Methyltransf_11" amino acids 50 to 144 (95 residues), 62.7 bits, see alignment E=1.7e-20

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu3676)

Predicted SEED Role

"Methyltransferase (EC 2.1.1.-)" (EC 2.1.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.1.1.-

Use Curated BLAST to search for 2.1.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CFI8 at UniProt or InterPro

Protein Sequence (298 amino acids)

>Atu3676 siderophore biosynthesis protein (Agrobacterium fabrum C58)
MSTVISSEASNYDHWAWLYNHTLGPRYSEQKIAPLARAVLSQLPNGASVLDLCCGTGHLA
KLMADRGYAVTGLDGSQDMINHARGNAPDLEFVLGDARDFTFEQPFDGVVCTSASLNHIQ
NTEDLRKVFSSVRRCLKDEGIFAFDINHPGQMARYWRDVPAEGELTDDYAWLITPRYNSQ
SNEGSFTVEIHTRPKAARFSLAEAAYRLAARLLSNRRRLALIARFGIPGNNWERHSVTNP
VWGHDLDTVTELLRASGFSVKMRSTDGGPVTDERAVYFLCTKIAGDRAGQEVTKEAVE