Protein Info for Atu2730 in Agrobacterium fabrum C58

Annotation: beta (1-->2) glucan biosynthesis protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 2831 transmembrane" amino acids 119 to 140 (22 residues), see Phobius details amino acids 170 to 188 (19 residues), see Phobius details amino acids 407 to 431 (25 residues), see Phobius details amino acids 437 to 463 (27 residues), see Phobius details amino acids 807 to 824 (18 residues), see Phobius details amino acids 830 to 852 (23 residues), see Phobius details amino acids 879 to 902 (24 residues), see Phobius details amino acids 934 to 951 (18 residues), see Phobius details amino acids 957 to 977 (21 residues), see Phobius details PF10091: Glycoamylase" amino acids 1297 to 1505 (209 residues), 64.1 bits, see alignment 2.1e-21 PF06165: Glyco_transf_36" amino acids 1560 to 1805 (246 residues), 227.4 bits, see alignment E=3.1e-71 amino acids 2071 to 2312 (242 residues), 242.7 bits, see alignment E=6.5e-76 PF17167: Glyco_hydro_36" amino acids 2342 to 2767 (426 residues), 392.7 bits, see alignment E=2.8e-121

Best Hits

Predicted SEED Role

"Cyclic beta-1,2-glucan synthase (EC 2.4.1.-)" (EC 2.4.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.4.1.-

Use Curated BLAST to search for 2.4.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q7CWD9 at UniProt or InterPro

Protein Sequence (2831 amino acids)

>Atu2730 beta (1-->2) glucan biosynthesis protein (Agrobacterium fabrum C58)
MSFHITPTAAARDSETKQIDHNDSIRASYMTIEELHDAGAALSRDGADSLPGFMEFDFFE
RHRENEKEILRVYRTTAVDAENGATITPAAEWLLDNHYVIEEAIQEVRRDFPRKFYRQLP
TMTVGGVTIPRVMALGWLYVAHTHSTVSRENMTALVDGYQTSQTLQIGELWALPSIIRFV
LIENLRRISIRVERSRRMRQKANEVVDEIIRLNDAEASAALLKQVDSLVDDPTFATQFLY
RLRNGSQTSGFAVAWLEERLHAAGTDAENVMMSEHNRLASGNVTMGNIVKSLREIDDTEW
SVWFEEVSHIDKVLREETDYEILDFGSRNTYRNTIELLARRSPRTEVEVARAAVEMARSD
LPAGADENHRVNVGSVLVGQRRFELEKALGYRPLASQHIVRSMRKFNWLAIAAPVLLITA
VAMLAVGWFLAKAGMPWYVVTAFLLMFALPASEGATGLFNTLVTFFVKPFRLVGYEFKNG
IPEDARTLVAVPCMLTSRDSVDEMMRNIEVHYLANPHGEIYFSLVSDWRDAPYEQSDEDL
EILDYAKRELAALNSRYAFDGKTRFYLLHRRRIYNSAEECWMGWERKRGKLHELNMLLRG
DKDTTFLGGANIVPADVKYVMTLDADTRLMRDAVTKLVGKMHHPINRPKIDPVSGRVVEG
YGLLQPRVTPSLTTGKDASVFQRVFSINRGIDPYVFTVSDVYQDLTSEGTFTGKGLYDVD
AFEAALKGRIEENSILSHDLLEGSFARCALVTDVELVEDFPTRYEVEVSRQHRWARGDWQ
LLPFIIDRARGVTAIGRWKMVDNLRRSLTPIAWFFASILGWYFMDPLGALIWQILLIFSL
FVAPTLSLLSGLVPRSTDIVPQAHFHTIWSEIRATNAQVALRIVFIADAACMMTDAIVRS
LYRLLVSHKLMLEWRTAASMQSSAQGSIVDYYRQMWHAPVVAMLGLLFAALPGDNAFLIG
IPFTLLWVLSPAVAWYVSQSAETEDRLFVSEHVSFELRKIARRTWRYYEAFVTPQENHLP
PDNFQETPEPIVASRTSPTNIGVYLLSVISARQFGWISFADTLERIENTIQTVEKMEKHR
GHLYNWYHTDTLQTLGPRYVSAVDSGNLAGHLIAVSSACRDWAEAPSAHLQGNLDGIGDV
AGILRETLKALPDNRKTLRPLHRRLEERIIGFSNALASVKREHEFASIRVINLAVLARDI
QKLATNVDHEVKSAQSAEVTRWAQLLVESCEAHISDSAIDLTNMEPLRQRLASLRDRSRN
LAFSMDFTFLYRKDRRLLSIGYRVESKELDEACYDLLASECRLTSLFAIAKGDLPTEHWY
RLGRQVVPIGAQGALVSWSGSMFEYLMPPLVMQERQGGILNQTNNLIVKEQMNHGRRLGT
PWGISEAAFNARDHNMNYQYTNFGVPTLGLKRGLGQNAVIAPYASILASQYDPDGALENL
DKLRKLGALGQYGFHDAVDFTPTRVPDGKVCAVVYNYYAHHHGMSIAAVANVAFDGVLRE
LFHSDPVIEAAELLLQEKAPREVPVMSAKYEPETPGKEQADLLRAEVRSIADPAVRDREV
VFLSNGHYSTMLTSTGAGYSKWNGQAISRWKADPTDDRWGTFIFLRDTTNGQWWSATAEP
RVIEGEKTKTIFTDDKAEFHKTIGDLQSVVECIVATEHDAEGRRITLLNVGSEDRYIEVT
SYMEPVIASEDDDNAHPLFSRMFVQTEIGRRGDVIRAWRNRRSQNEPGTVIAHLAADNAG
PSRPTEFETDRAKFIGRGRSLREAAAFDAGATLSSSDGFTLDPILSLRRTVRVPAGKKVS
VIFWTIAAPSREEVDKAIDRYRHPDAFAHELVHAWTRTQVQMRHVGVTSQQAAAFQHLGR
YLTYPDMHLRADSETLKTGLASQRALWPLAISGDFPIFSLRINDDMDMDIAREALSAHEY
LRSRGVIFDLVIVNERAASYAQDMQHALDHISETQRRINPADGGRPHVFSVRRDLMDEET
WSALLAASRVVLHVRNGKIVDQINRAVSLFAANRGPDGSSDAAQARLPVPAFPVAEPVED
AGDLDFWNGFGGFAKNGQEYVVRLNGGQSTPHPWINVISNENFGFHISAEGAGFSWSRNS
RDYQLTPWTNDPVINRPGEAFYVADVETGKLYTPCAALSRDPEAMFETRHGLGYSILTGV
ADTLEVELTQTVDREKPVKFSQVIVRNKGSKSRRLKVYAYVEWVLGNNGQKSAPFILSRH
DAGSNAIFASNPYSIDYSARTSFLTLDSEASGFTTSRREFIGRFGSAQAPQGIVAGAALS
GTTEVDGDPCAALMQEIHLKPGEERHMTFILGDADNAEEAEALVKDVRQADFLSVLEESK
KFWTGFTGQLQVSTPDAGFNHMVNNWLPYQALACRILARTAFYQSSGAFGFRDQLQDTLA
FLLYQPDLARTQILRAAGRQFPEGDVQHWWLPLTGAGVRTTISDDVVWLAYAINQYVSAT
GDAAILDESIPFLKGPALMPGQHDAFFQPETSERSATLYEHAALALDLAIHRTGENGLPL
ILGGDWNDGMNRVGVGGKGTSVWLGWFLAGALRDFIEIAEKRGDTDRVGKWASHREKLRH
VLETAGWDGSYYRRGYFDDGTPLGSASSEECQIDSLGQSWSVLSGEGEEGRSRQAMDAVM
EHLVDEKTGIIRLFTPPFSRASHDPGYIKGYPPGVRENGGQYTHAATWVVLALAKQGRAQ
EAWNCFKLLNPVNHALDAASSETYRVEPYVVTADVYGEGAYAGRGGWSWYTGSAGWLYRA
AVEGILGITRTDGKLHVSPSLPEDWSGFSIRITLDGKARDIAVSRKAGTADVSVSVDGKD
LAAGDGVIPFD