Protein Info for Atu2498 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 128 TIGR03610: pyrimidine utilization protein C" amino acids 1 to 127 (127 residues), 261 bits, see alignment E=8.1e-83 PF01042: Ribonuc_L-PSP" amino acids 13 to 125 (113 residues), 117 bits, see alignment E=2.6e-38

Best Hits

Swiss-Prot: 100% identical to RUTC_AGRFC: Putative aminoacrylate peracid reductase RutC (rutC) from Agrobacterium fabrum (strain C58 / ATCC 33970)

KEGG orthology group: K09021, UPF0076 protein RutC (inferred from 98% identity to agr:AGROH133_08497)

MetaCyc: 76% identical to 3-aminoacrylate deaminase (Escherichia coli K-12 substr. MG1655)
RXN0-6452

Predicted SEED Role

No annotation

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q7CWX2 at UniProt or InterPro

Protein Sequence (128 amino acids)

>Atu2498 hypothetical protein (Agrobacterium fabrum C58)
MPKKIIVPVGTSKPIAPFSPGTLADGVVYVSGTLPFDKDNNVVHVGDASAQTRHVLETIK
SVIETAGGTMEDVTMNHIFITDWANYQAVNTVYAEYFPGDKPARYCIQCGLVKPDALVEI
ATVAHIGK