Protein Info for Atu2492 in Agrobacterium fabrum C58

Annotation: MFS permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 614 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 48 to 68 (21 residues), see Phobius details amino acids 80 to 98 (19 residues), see Phobius details amino acids 104 to 125 (22 residues), see Phobius details amino acids 147 to 171 (25 residues), see Phobius details amino acids 181 to 201 (21 residues), see Phobius details amino acids 235 to 255 (21 residues), see Phobius details amino acids 273 to 294 (22 residues), see Phobius details amino acids 303 to 324 (22 residues), see Phobius details amino acids 513 to 539 (27 residues), see Phobius details amino acids 554 to 576 (23 residues), see Phobius details amino acids 582 to 602 (21 residues), see Phobius details PF00083: Sugar_tr" amino acids 10 to 319 (310 residues), 103 bits, see alignment E=1.9e-33 amino acids 486 to 613 (128 residues), 31.5 bits, see alignment E=9.6e-12 PF07690: MFS_1" amino acids 14 to 324 (311 residues), 95.9 bits, see alignment E=2.4e-31

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu2492)

Predicted SEED Role

"Permeases of the major facilitator superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q7CWX7 at UniProt or InterPro

Protein Sequence (614 amino acids)

>Atu2492 MFS permease (Agrobacterium fabrum C58)
MTGEEKKVIFASSLGTVFEWYDFYLYGSLAIYIGANFFSQYPETTRNIFALLAFAAGFLV
RPFGALVFGRLGDIVGRKYTFLITILIMGVSTFLVGVLPGASQIGIAAPIILIILRMLQG
LALGGEYGGAATYVAEHAPNGRRGYYTSWIQTTATLGLFLSLMVILGVQFALGKEAFAAW
GWRIPFLVSVLLLGVSVWIRLKMNESPAFKKMKEEGKTSKAPLSEAFGQWKNAKIALLAL
VGAVIGQAVVWYTGQFYALFFLQSILKVDGQSANIMVAAALILGTGFFVLFGWLSDKIGR
KPIIMAGLILAMLTYFPLFKALTWAGNPALAQAQSTVRATVTAAPGDCKFQFNPTGTAKF
TTSCDIATSFLTRNSVPYDVVAGAAGEPASVKLGDATIASYDAIAAGADASAKDKAFQKQ
INIALHDSGYPLVRGAAQVPDAKLDAFIAANPELNLNADAVRATDKKMVATDKLVADKLL
TPAETAGAAEMAVYTIAGGGAFTMVADPAAVNWIVIIAVLTVLVIYVTMVYGPIAALLVE
LFPTRIRYSGMSLPYHIGNGWFGGLLPATAFAMSAAKGDIYYGLWYPIVFAGITLVIGLL
FLPETKDRDIHTME