Protein Info for Atu2476 in Agrobacterium fabrum C58

Annotation: ABC transporter, nucleotide binding/ATPase protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 18 to 164 (147 residues), 110.1 bits, E=1.4e-35

Best Hits

Swiss-Prot: 54% identical to YCLP_BACSU: Petrobactin import ATP-binding protein YclP (yclP) from Bacillus subtilis (strain 168)

KEGG orthology group: K02013, iron complex transport system ATP-binding protein [EC: 3.6.3.34] (inferred from 100% identity to atu:Atu2476)

MetaCyc: 42% identical to ferric citrate ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-9-RXN [EC: 7.2.2.18]

Predicted SEED Role

"Iron compound ABC transporter, ATP-binding protein"

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.34

Use Curated BLAST to search for 3.6.3.34 or 7.2.2.18

Sequence Analysis Tools

See A9CHS4 at UniProt or InterPro

Protein Sequence (252 amino acids)

>Atu2476 ABC transporter, nucleotide binding/ATPase protein (Agrobacterium fabrum C58)
MIIASQISKSYGDTLVVDGVSVSIPAGGVTSIIGPNGAGKSTLLSIVARLMSMDTGTVTV
DGLDVTKTPSETLAKRLSILRQDNHISSRLTVRDLVGFGRYPYSKGRPTIEDKVHIDRAL
EYLHLENLAGRFLDELSGGQRQRAFVAMVLCQDTDYVLLDEPLNNLDMKHASGMMKIMRR
AADELKKTVVLVLHDINFASWYSDTIIAMREGRICHQGPADGIISPDILEDIYDMPIRVE
EIDGRRICLFYE