Protein Info for Atu2361 in Agrobacterium fabrum C58

Annotation: MFS permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details transmembrane" amino acids 46 to 69 (24 residues), see Phobius details amino acids 77 to 95 (19 residues), see Phobius details amino acids 106 to 124 (19 residues), see Phobius details amino acids 136 to 158 (23 residues), see Phobius details amino acids 164 to 183 (20 residues), see Phobius details amino acids 203 to 224 (22 residues), see Phobius details amino acids 239 to 262 (24 residues), see Phobius details amino acids 269 to 292 (24 residues), see Phobius details amino acids 299 to 323 (25 residues), see Phobius details amino acids 332 to 355 (24 residues), see Phobius details amino acids 367 to 384 (18 residues), see Phobius details PF07690: MFS_1" amino acids 12 to 348 (337 residues), 153.9 bits, see alignment E=5.4e-49 amino acids 211 to 384 (174 residues), 43.5 bits, see alignment E=2.1e-15 PF00083: Sugar_tr" amino acids 47 to 185 (139 residues), 41.4 bits, see alignment E=9.4e-15

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu2361)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CHY3 at UniProt or InterPro

Protein Sequence (400 amino acids)

>Atu2361 MFS permease (Agrobacterium fabrum C58)
MTENSPALKLTLLFVATLTIMAGTTVAPSLPAIEQSFLSTPDVEIMSRMVLTLPSVFVAL
CAPIAGVLADRFGRKRLLLGAILLYSLSGISGLFADSLAGLLVGRAFLGLAIGGIMTIGT
ALVGDYFEGPARERYLGLQQAFTQLGGVVFVVAGGWLADIHWRAPFAVYAVALLILPAAL
FFLREPARNSSRATQNGEQGLAVNWLPVAVLAMAVFLVNALFYTIPSQLPFFLREFGVLS
GSVAGYAIGIFNLAGALMALSFGRLRARIGVTVILAAGLVLMATGFALLATAGGLSSMLS
ALAVVGAGLGAVMPSIMSTTIMLAPLRLRGRIAGIVTASMFLGHFISPLVSQPWIARFGF
ATTYRDIALVFAVMAGLAAIATIFQRRTGIRKAQPLTRGG