Protein Info for Atu2358 in Agrobacterium fabrum C58

Annotation: acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 327 transmembrane" amino acids 9 to 28 (20 residues), see Phobius details amino acids 30 to 31 (2 residues), see Phobius details amino acids 37 to 60 (24 residues), see Phobius details amino acids 69 to 92 (24 residues), see Phobius details amino acids 112 to 135 (24 residues), see Phobius details amino acids 140 to 159 (20 residues), see Phobius details amino acids 166 to 184 (19 residues), see Phobius details amino acids 193 to 211 (19 residues), see Phobius details amino acids 217 to 238 (22 residues), see Phobius details amino acids 258 to 276 (19 residues), see Phobius details amino acids 282 to 301 (20 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 5 to 296 (292 residues), 76.4 bits, see alignment E=1.1e-25

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu2358)

Predicted SEED Role

"Exopolysaccharide production protein ExoZ"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CHY5 at UniProt or InterPro

Protein Sequence (327 amino acids)

>Atu2358 acetyltransferase (Agrobacterium fabrum C58)
MQKVYSIQFLRALAAFSVLLFHIIGEPFTIGAAGVDVFFVISGLIMGSFATTAGPGAFLY
HRLVRIVPLYWAVTLLMCVGAMAGVFSTFTFTLEHLWKSLLFIPYAGDSGEVVPLLVVGW
TLNMEMFFYIVFALGLALRAPLAVTVGILSVMALAGQVFPSQSPFMQTWTSPLLLEFLGG
LLLSRFMFQGVQAGIAALVISMTGFVAAALISEQSGMLRLMTWGVPAFFLVAGCVWLENG
GLWPRRLLKPVEIVGDSSYALYLLHGLVISIVHKILAPGFLAGTVIIIVAVAVSISAHFL
FEKPLIRLFRRGYGGRPRRQDQAVSMR