Protein Info for Atu2052 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1234 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF05170: AsmA" amino acids 7 to 171 (165 residues), 48 bits, see alignment E=9.2e-17 PF13502: AsmA_2" amino acids 886 to 1089 (204 residues), 101.9 bits, see alignment E=4.4e-33

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu2052)

Predicted SEED Role

"FIG00984239: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CIC7 at UniProt or InterPro

Protein Sequence (1234 amino acids)

>Atu2052 hypothetical protein (Agrobacterium fabrum C58)
MLGRILVFLGGLLALVLFSALLIPYFVDWTDFRRDFEDQASRILGKKVVVHGRVEARLLP
FPSVTLHDVRAGTDADGSPLIQVARFSMDAELAPFLSGEARIFDMRIEEPKAKIRLLKDG
TLDWMRGSRAEIPARTVVLESVQIEGGQIEFIDEQSGRNRVVTGLNADMSANSLAGPWKA
EGRAAVDGHPGSFSLSSSEPDYANGRMGLRLRLVPDEHPVEVDLDGAIAATAGKPAYSGS
FSFSFREDEKQKQQAGQSLFSSPRTRGSFELTNESVRIPSYRMELGASENPYIVTGEATL
DTGAKPEFLLTADGQQIDVARFAPPVVQTGKTSRQPTVSVRQRVEAFAAMVARIPVPPVP
GKASISLPALVSDDTTIRDIRLDVRPDGSGWQVVNAVATLPGRTQLEAKGSLTLLGGPAF
NGNLLLASNQPSGLANWLSGSVDPAIRQLNAAGFSADVSLTTLNQRFNNLELAIGDASLK
GELERRSDGKTSNLSIDLAGNEIDLDALRALGSLALGDQVGSSVLDHRITAKFKADRFNM
AGVTANHVETAFTMAGGVLSLENMTAGDIAGAEVKAKGQLQGSLLKYAGKGTVNLHAADM
QPFFTMLQQKLPDHPFLSRLAASAPWYANSDLAMDVSVNSDNGGANVAVSGTVNGSRLSA
VAKMPDFLSITDDTAMSLEAVLKNQSTAILFGQAGLDPLPFDADGEGLLSVKLNGTLGSP
AQTELRFSTERTHFSMNGSFAVAAANFGEGSADVALESADIEPYLIMNAVGLPQLGGGMA
VKANAKVAVDGQKIAFSSIGGQAGGNPFSGNVTVQRAAPHPVTGELSVRTADLAWLGDVI
YGPVIDPETGALNAKPLAMPAFPQLKASLALKAESFEAGPFGTVTGVSAKLTHDAGSLSL
DDVAGTFMGGKLAGRLAMSTGEGAGIFRSKIAVTDANPEPILWANANGPVATGRVAIDLT
AESTGKSVGEMLKSAGGSGEVRASGLVLKGLNPGALPPILQAADGLQQPIDAPKVRPLVD
QSLWQGEIALGDVALPFSLNGGALHFKNLRAGIDPVTLTADATVDIAASTVNGDLNLLFN
PGTETVAGAEPSVRLNYNGPLAAPALTTDVSALSNYLSLRAFEKERRRVEAMQASVLEKQ
RLRREVALYRSQAAERQAEKERAEAEAKAKAEEEARLKAAAEERLRQEKEQQERLQQQQQ
QQPAPERKSAPALVVPPTEDAIRQLAPENAPATP