Protein Info for Atu1687 in Agrobacterium fabrum C58

Annotation: anthranilate phosphoribosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 342 PF02885: Glycos_trans_3N" amino acids 5 to 66 (62 residues), 83.7 bits, see alignment E=6.1e-28 TIGR01245: anthranilate phosphoribosyltransferase" amino acids 9 to 332 (324 residues), 384.7 bits, see alignment E=1.9e-119 PF00591: Glycos_transf_3" amino acids 75 to 323 (249 residues), 308.4 bits, see alignment E=4.6e-96

Best Hits

Swiss-Prot: 100% identical to TRPD_AGRFC: Anthranilate phosphoribosyltransferase (trpD) from Agrobacterium fabrum (strain C58 / ATCC 33970)

KEGG orthology group: K00766, anthranilate phosphoribosyltransferase [EC: 2.4.2.18] (inferred from 100% identity to atu:Atu1687)

Predicted SEED Role

"Anthranilate phosphoribosyltransferase (EC 2.4.2.18)" in subsystem Auxin biosynthesis or Tryptophan synthesis (EC 2.4.2.18)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.2.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8UER8 at UniProt or InterPro

Protein Sequence (342 amino acids)

>Atu1687 anthranilate phosphoribosyltransferase (Agrobacterium fabrum C58)
MAELKPLIAKVANGESLNREDARTAFDILMSGEATPSQIGGFLMALRVRGETVDEIVGAV
SSMRARMLPVSAPANAIDIVGTGGDGIGTYNISTLASIITAGTGLPVAKHGNRALSSKSG
TADALSALGVRLDIGPDLIARCIAEAGLGFMFAQMHHSAMRHVGPSRVELGTRTIFNLLG
PLSNPAGAKRQLLGVFSPRWLVPLAEVLRDLGSESIWVVHGDGMDEVTTTGVTHVAALED
GKIRTFDLTPKDFGVEPALMNDLKGGDGIANAAALREVLSGKRNAYRDISLCNAAAALVI
AGKAETLSQAMTIASDALDSGKAAAALDRLVAVSNEANSGQE