Protein Info for Atu1545 in Agrobacterium fabrum C58

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 321 transmembrane" amino acids 21 to 37 (17 residues), see Phobius details amino acids 57 to 78 (22 residues), see Phobius details amino acids 90 to 108 (19 residues), see Phobius details amino acids 114 to 133 (20 residues), see Phobius details amino acids 139 to 156 (18 residues), see Phobius details amino acids 182 to 205 (24 residues), see Phobius details amino acids 226 to 247 (22 residues), see Phobius details PF07786: HGSNAT_cat" amino acids 15 to 234 (220 residues), 260.2 bits, see alignment E=1.5e-81

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu1545)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CIY2 at UniProt or InterPro

Protein Sequence (321 amino acids)

>Atu1545 hypothetical protein (Agrobacterium fabrum C58)
MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYAR
GIASSFLFLAGFSLFLAHGRGLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILH
NIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFNAKWLAWIGFSTMPPRSNDYV
PLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV
YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGK
LSADQQTKVSEVAQQCTVEAQ