Protein Info for Atu1539 in Agrobacterium fabrum C58

Annotation: sulfate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 537 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details transmembrane" amino acids 34 to 50 (17 residues), see Phobius details amino acids 57 to 77 (21 residues), see Phobius details amino acids 83 to 105 (23 residues), see Phobius details amino acids 117 to 138 (22 residues), see Phobius details amino acids 159 to 177 (19 residues), see Phobius details amino acids 184 to 203 (20 residues), see Phobius details amino acids 234 to 253 (20 residues), see Phobius details amino acids 307 to 353 (47 residues), see Phobius details amino acids 362 to 393 (32 residues), see Phobius details PF00916: Sulfate_transp" amino acids 7 to 360 (354 residues), 216.7 bits, see alignment E=4.4e-68 PF01740: STAS" amino acids 420 to 524 (105 residues), 35.1 bits, see alignment E=1e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu1539)

Predicted SEED Role

"Sulfate permease family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A9CIY6 at UniProt or InterPro

Protein Sequence (537 amino acids)

>Atu1539 sulfate permease (Agrobacterium fabrum C58)
MGNNGRDILAGLSVAGLMLPEAIAYSGIAGVPPQHALYAAMAGCLVYALLGQSRFAIISP
TSSSAAILAAMLAALVPQPGQKMLLVAVAVFLVGLFFLAAGTLRLGALSSIISRPVLRGF
AFGLAILISLKQFPAIFGMPQAGAGTFEAILQILTNPGQWNGFSLSIGIAALILLLFARR
YPQIPGSLIIIALAIPISVMFDLQQRGVDVVGPIDLSGIWGSVTTLSLDELAHVARFAPP
LVLILFAESWGTIRGLSLRHGEDVDANRELKTLGIANVASAALQGMPVGAGFSAGAASEA
ANPRTRMASAIAAIGLAGFTFAAADWFAYIPHAALSAIIIVALLHALDPSPFLRLWRLRQ
DLVLALAATAGVLFLGVLNGMLAAIVLSFAVFLQRLSSPRIVMLGRLGASHDFVDVKRHP
DAAEPAGMLVLRPAQPLFFGNAEPTFAEITRRILASPDINAVIISLEETFELDTTALEAL
LEFDASLRGRNIGIRYAPMHDAVRDVVAAGGGDDLLRRANYSVDDAVAAMDGLKEEK