Protein Info for Atu1174 in Agrobacterium fabrum C58

Annotation: H+ translocating pyrophosphate synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 712 transmembrane" amino acids 6 to 26 (21 residues), see Phobius details amino acids 53 to 72 (20 residues), see Phobius details amino acids 77 to 99 (23 residues), see Phobius details amino acids 120 to 146 (27 residues), see Phobius details amino acids 158 to 177 (20 residues), see Phobius details amino acids 235 to 255 (21 residues), see Phobius details amino acids 261 to 281 (21 residues), see Phobius details amino acids 293 to 318 (26 residues), see Phobius details amino acids 333 to 355 (23 residues), see Phobius details amino acids 381 to 403 (23 residues), see Phobius details amino acids 408 to 431 (24 residues), see Phobius details amino acids 473 to 491 (19 residues), see Phobius details amino acids 518 to 544 (27 residues), see Phobius details amino acids 589 to 610 (22 residues), see Phobius details amino acids 616 to 639 (24 residues), see Phobius details amino acids 694 to 710 (17 residues), see Phobius details TIGR01104: V-type H(+)-translocating pyrophosphatase" amino acids 6 to 712 (707 residues), 869 bits, see alignment E=1.6e-265 PF03030: H_PPase" amino acids 12 to 706 (695 residues), 846.7 bits, see alignment E=7.2e-259

Best Hits

Swiss-Prot: 100% identical to HPPA_AGRFC: K(+)-insensitive pyrophosphate-energized proton pump (hppA) from Agrobacterium fabrum (strain C58 / ATCC 33970)

KEGG orthology group: K01507, inorganic pyrophosphatase [EC: 3.6.1.1] (inferred from 100% identity to atu:Atu1174)

Predicted SEED Role

"Pyrophosphate-energized proton pump (EC 3.6.1.1)" in subsystem Phosphate metabolism (EC 3.6.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.6.1.1

Use Curated BLAST to search for 3.6.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8UG67 at UniProt or InterPro

Protein Sequence (712 amino acids)

>Atu1174 H+ translocating pyrophosphate synthase (Agrobacterium fabrum C58)
MTVIPIVILCGVLSVVYAVWTTKSVLDADQGNERMREIAGYIREGAQAYLTRQYLTIAIV
GLIVAVLAWYLLSAIAAIGFVIGAVLSGVAGFVGMHVSVRANLRTAQAASHSLGAGLDIA
FKSGAITGMLVAGLALLGVSIYYFVLTSVLGHPPGSRAVIDALVSLGFGASLISIFARLG
GGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVV
ATMVLAAIFFAGTPILESAMVYPLAICGACILTSIAGTFFVKLGTNNSIMGALYKGLIAT
GVFSVAGLAVATYATVGWGTIGTVAGMEITGTNLFFCGLVGLVVTALIVVITEYYTGTNK
RPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVGGIIGTYQLGGLFGTGIAVTAML
GLAGMIVALDAFGPVTDNAGGIAEMAGLDPDVRKATDALDAVGNTTKAVTKGYAIGSAGL
GALVLFAAYANDLSYFAANGDTYPYFKDIGEISFSLANPYVVAGLLFGGLIPYLFGGIAM
TAVGKAASAIVEEVRRQFREKPGIMAGTEKPDYGRAVDLLTKAAIREMVIPSLLPVLAPL
VVYFGVLLISGSKASAFAALGASLLGVIINGLFVAISMTSGGGAWDNAKKSFEDGFIDKD
GVRHVKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLAH