Protein Info for Atu0758 in Agrobacterium fabrum C58

Annotation: molecular chaperone, DnaJ family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 371 PF00226: DnaJ" amino acids 3 to 65 (63 residues), 74.7 bits, see alignment E=5.2e-25 PF01556: DnaJ_C" amino acids 214 to 349 (136 residues), 85.9 bits, see alignment E=3e-28

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu0758)

Predicted SEED Role

"DnaJ-class molecular chaperone CbpA" in subsystem Protein chaperones

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q7D0R3 at UniProt or InterPro

Protein Sequence (371 amino acids)

>Atu0758 molecular chaperone, DnaJ family (Agrobacterium fabrum C58)
MRDPYSILGVKRDARHEDIKAAWRTKAKTVHPDANRDDPDASARFAEIGQAYDLLKDSKK
RDLYDQARQAAEKKKRGETIMQQREAAREAAERAKAAEKLMEELARADARNRAQTGQKTD
AKPETAEDIVERIFGADAQNDPKVQQAAEAAKAAASAAKGDIPAAGDTAQSAAGDDRTAP
ASLAVNLFNALVRRFRPAQPAAEKVPDITAEATVTVADLLEHKWVTLQLADEREIRFQLE
AGMADGHIVRLKGQGLKLPNLARGDLAVTLLAARDDAFSLRGFDIHTTLPISLSDAVLGC
EAKVATPLGEENITIPAWSGSDRVLRLAGKGLADGKGGSGDLVIELRIVLLEKPDEKVTD
LMRHMREGLYL