Protein Info for Atu0159 in Agrobacterium fabrum C58

Annotation: ABC transporter, nucleotide binding/ATPase protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 26 to 164 (139 residues), 115.6 bits, E=1.4e-37

Best Hits

Swiss-Prot: 57% identical to Y412_METJA: Uncharacterized ABC transporter ATP-binding protein MJ0412 (MJ0412) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

KEGG orthology group: K02049, sulfonate/nitrate/taurine transport system ATP-binding protein (inferred from 100% identity to atu:Atu0159)

MetaCyc: 47% identical to taurine ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-64-RXN [EC: 7.6.2.7]

Predicted SEED Role

"ABC transporter ATP-binding protein with unknown substrate"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.6.2.7

Sequence Analysis Tools

See Q7D228 at UniProt or InterPro

Protein Sequence (261 amino acids)

>Atu0159 ABC transporter, nucleotide binding/ATPase protein (Agrobacterium fabrum C58)
MSELVIKGVSRTFPGVQGGQPTLALQPTNLEIPRNDFVTILGPSGCGKSTLLRIIAGLDR
PTTGEVLLSGKAVTGPGADRGMVFQSYTLFPWLTIRENVAFGLRERGVAEKEKWEIVDSY
IDKVGLRGFENHWPKQLSGGMQQRTAIARALANGPKILLLDEPFGALDNQTRGLMQELLL
GIWEREQKTVIFVTHDIEEAVFMASRVVTMSARPGRIKSITPVDLPHPRHYTIKASPEFS
ELRAKLTEEIRSEAIAAAAHG