Protein Info for AMB_RS22980 in Magnetospirillum magneticum AMB-1

Annotation: murein transglycosylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF03562: MltA
  • amino acids 127 to 282 (156 residues), 179.9 bits, E=3.9e-57
• PF06725: 3D
  • amino acids 303 to 374 (72 residues), 75.3 bits, E=3.5e-25

Best Hits

KEGG orthology group: K08304, membrane-bound lytic murein transglycosylase A [EC: 3.2.1.-] (inferred from 100% identity to mag:amb4542)

Predicted SEED Role

"Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)" (EC 3.2.1.-)

KEGG Metabolic Maps

• Ascorbate and aldarate metabolism
• Glycosaminoglycan degradation
• Nucleotide sugars metabolism
• Ubiquinone and menaquinone biosynthesis

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.-

Use Curated BLAST to search for 3.2.1.-

Sequence Analysis Tools

See Q2VYH9 at UniProt or InterPro

Protein Sequence (387 amino acids)

>AMB_RS22980 murein transglycosylase (Magnetospirillum magneticum AMB-1)
MRRFAAAALVAASLAACATPEPAPAPAPAGPDRMVLQPLSFDQLAGWSEDESARVLPALL
KSCNRITKLPLDKSVGFEGVGGTAADWYAPCAAAQRVADGDHMAARILFESWFTPWRVTN
GGRADGLFTGYFEPEIRGSRQRKAPYIHPIFGKPNDLVVTGSGEQAIGRMENGRLVPYYT
RAEIDKGVLIGKAPVLVWTDDPVDLAIMQIQGSGRVRLDDGSVIRLGVAGSNGHKFVGIG
KVLKDEGKLGADTSMPAIRAWLKAHPEEGRTLLGRNPRYIFYGFNTGGEGPLGTEGVALT
PERSLAVDPRFVPLGAPVWVDSIDPAGRPLRRLMVAQDTGAAIKGPVRGDVFWGAGEAAF
QVAGKMKSPGRLVLFLPRARSPRLAER