Protein Info for AMB_RS22590 in Magnetospirillum magneticum AMB-1

Annotation: PhoH family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 326 PF02562: PhoH" amino acids 110 to 313 (204 residues), 306.2 bits, see alignment E=1.5e-95 PF13604: AAA_30" amino acids 115 to 266 (152 residues), 27.9 bits, see alignment E=2.9e-10 PF13245: AAA_19" amino acids 126 to 266 (141 residues), 25.5 bits, see alignment E=1.9e-09

Best Hits

KEGG orthology group: K06217, phosphate starvation-inducible protein PhoH and related proteins (inferred from 100% identity to mag:amb4464)

Predicted SEED Role

"Phosphate starvation-inducible protein PhoH, predicted ATPase" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2VYQ7 at UniProt or InterPro

Protein Sequence (326 amino acids)

>AMB_RS22590 PhoH family protein (Magnetospirillum magneticum AMB-1)
MSNGDTSLMREFPDNALAQVLFGPHNANLERIEGHLGVGLDVRGNTVAISGTPDSAAEAA
RILDSLYALAKRQGHLETPDVDSAVRMAKLPDGHEDAAGDLVIRTRKRHIAARTPTQAEY
IRALGEAPLTFGLGPAGTGKTYLAVAKAVSMMVAGEVDRIILSRPAVEAGERLGFLPGDL
KDKVDPYLRPLYDALYDMLPGDQVAKKLLAGEIEVAPLAFMRGRTLANSFIILDEAQNTT
TMQMRMFLTRMGEHSRMVVTGDVSQTDLPAGVRSGLADAIHILDGIQGVRFVRFTDRDVV
RHDLVTRIVRAYDKADREAKGKTRDQ