Protein Info for AMB_RS22555 in Magnetospirillum magneticum AMB-1

Annotation: N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 159 PF00583: Acetyltransf_1" amino acids 19 to 130 (112 residues), 52 bits, see alignment E=1.7e-17 PF13508: Acetyltransf_7" amino acids 63 to 132 (70 residues), 36.2 bits, see alignment E=1.3e-12 PF08445: FR47" amino acids 65 to 132 (68 residues), 25.7 bits, see alignment E=1.8e-09 PF13673: Acetyltransf_10" amino acids 70 to 149 (80 residues), 30 bits, see alignment E=9e-11

Best Hits

KEGG orthology group: K03789, ribosomal-protein-alanine N-acetyltransferase [EC: 2.3.1.128] (inferred from 100% identity to mag:amb4457)

Predicted SEED Role

"Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)" in subsystem Bacterial RNA-metabolizing Zn-dependent hydrolases or Conserved gene cluster associated with Met-tRNA formyltransferase or Ribosome biogenesis bacterial (EC 2.3.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.-

Use Curated BLAST to search for 2.3.1.- or 2.3.1.128

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2VYR4 at UniProt or InterPro

Protein Sequence (159 amino acids)

>AMB_RS22555 N-acetyltransferase (Magnetospirillum magneticum AMB-1)
MIELVPAGLVHAELLAGMHRICFTEPWSATSMAEVLALAGTEGLIAVEGGSLAPALEPPG
PAGLILWRRIFDEAEILTVCVLPPWRRRGVGARLLDGAMDRAIGGGALTMFLEAAADNEA
ALALYASRGFERVGLRRGYYGAIDGVTMSCRLDKIPVQH