Protein Info for AMB_RS22145 in Magnetospirillum magneticum AMB-1

Annotation: dienelactone hydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 288 signal peptide" amino acids 1 to 39 (39 residues), see Phobius details PF01738: DLH" amino acids 64 to 284 (221 residues), 198.7 bits, see alignment E=4.7e-63

Best Hits

Swiss-Prot: 62% identical to DLHH_METEA: Putative carboxymethylenebutenolidase (MexAM1_META1p1735) from Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)

KEGG orthology group: K01061, carboxymethylenebutenolidase [EC: 3.1.1.45] (inferred from 100% identity to mag:amb4377)

Predicted SEED Role

"Dienelactone hydrolase family"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.1.45

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2VYZ4 at UniProt or InterPro

Protein Sequence (288 amino acids)

>AMB_RS22145 dienelactone hydrolase family protein (Magnetospirillum magneticum AMB-1)
MDDDVKSLSPKIDMTRRGFVSAAVLATGYALAVSPASAGAITTDSQGLSAGAVMIPTPGG
HPLPAYAAMPAGKGPFPIILVIQEIFGVHEHIRDVCRRFAKLGYLAVAPELYFRQGDPAV
LTDIPTILSTIVAKVPDSQVLSDLDAAAAWAAANGGDGDRLGVTGFCWGGRAVWLYSAHN
PKLKAAVAWYGKLVGAPSAETPKHPVDIAADLHAPVLGLYGGADQGIPLDSIEKMKAATK
PARVKVEFVVYPDTPHAFHADYRPSYREGPAKDGWAKALAWFKTNGVG