Protein Info for AMB_RS21060 in Magnetospirillum magneticum AMB-1

Annotation: MoxR family ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 330 PF20030: bpMoxR" amino acids 20 to 200 (181 residues), 36.4 bits, see alignment E=5.9e-13 PF07726: AAA_3" amino acids 51 to 184 (134 residues), 189.5 bits, see alignment E=4.2e-60 PF07728: AAA_5" amino acids 52 to 182 (131 residues), 36.9 bits, see alignment E=7e-13 PF17863: AAA_lid_2" amino acids 257 to 324 (68 residues), 49.8 bits, see alignment E=4.8e-17

Best Hits

KEGG orthology group: K03924, MoxR-like ATPase [EC: 3.6.3.-] (inferred from 100% identity to mag:amb4161)

Predicted SEED Role

"FIG017823: ATPase, MoxR family"

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.-

Use Curated BLAST to search for 3.6.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2VZL0 at UniProt or InterPro

Protein Sequence (330 amino acids)

>AMB_RS21060 MoxR family ATPase (Magnetospirillum magneticum AMB-1)
MTPHTSSAAPQDEIAALESRLSEARAAIGRVIFGQDEVIDQSLITLLAGGHALLIGLPGL
AKTRLVHTLGIVLGLDDKRVQFTPDLMPADILGSEVLEEGAGGARAFRFIQGPVFCQLLM
ADEINRAGPRTQSALLQAMQEHHVSVAGARQDLPRPFHVLATQNPLEQEGTYPLPEAQLD
RFLMQIDVGYPDRDAERRMLIDTTGAVSAEAERVMGADDLLAAQALVRRIPVGDAVVDAI
LNLVRQGRPESTSLDLVRRAVAWGPGPRAAQALMLAVRARALLQGRLSPSVDDIRALAAP
VLRHRMALGFAARADGITLAQVIEALDGTL