Protein Info for AMB_RS20800 in Magnetospirillum magneticum AMB-1

Annotation: carboxypeptidase M32

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

Best Hits

KEGG orthology group: K01299, carboxypeptidase Taq [EC: 3.4.17.19] (inferred from 100% identity to mag:amb4113)

Predicted SEED Role

"Thermostable carboxypeptidase 1 (EC 3.4.17.19)" (EC 3.4.17.19)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.17.19

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2VZQ8 at UniProt or InterPro

Protein Sequence (512 amino acids)

>AMB_RS20800 carboxypeptidase M32 (Magnetospirillum magneticum AMB-1)
MVYRSLTRRYQVSPMSTNPAYATLEARFRKMNSVAEALSVLSWDMATMMPEGAAEMRAEQ
VATLRGINHEQITAPDMGELLDRAAAEPLDAWQAANLREMRRDWIHASALPADLVEAQAR
AESACEMVWRQARPAGDFKAVLPALKVLLGLVREVGHVKAEALGVSIYDALLDQYEPLGR
AAEIDPVFDHLETFLPGFIGEVLDAQNARPPIIEPDGPFATDRQKALGIRLMEVLGFDFR
HGRLDVSHHPFCGGYPGDIRVTTRYNEDDFASAMMGVLHETGHALYEFGLPSGHWRPQPV
GRARGMVVHESQSLLMEMQVCRSKEFAGFLSPLLKSTFGAEGPAWEPDNIYRRGIKVSRG
FIRVEADEVTYPAHVIIRYRLEKALIEGRMELEDLPAAWNEGYQRLLGITPPDDRLGCLQ
DIHWYGGAWGYFPTYTLGAMTAAQLFDAACHADPAVMKGLAGGDFRPLLGWLRANVHSKG
SLLSTRQLMTQATARPLDPTVFETHLRRRYLG