Protein Info for AMB_RS17090 in Magnetospirillum magneticum AMB-1

Annotation: molybdopterin oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 403 transmembrane" amino acids 17 to 37 (21 residues), see Phobius details amino acids 58 to 80 (23 residues), see Phobius details amino acids 92 to 110 (19 residues), see Phobius details amino acids 130 to 151 (22 residues), see Phobius details amino acids 164 to 187 (24 residues), see Phobius details amino acids 194 to 219 (26 residues), see Phobius details amino acids 239 to 261 (23 residues), see Phobius details amino acids 281 to 301 (21 residues), see Phobius details amino acids 312 to 335 (24 residues), see Phobius details amino acids 365 to 388 (24 residues), see Phobius details PF03916: NrfD" amino acids 44 to 334 (291 residues), 169.6 bits, see alignment E=7e-54

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb3378)

Predicted SEED Role

"Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB)" in subsystem Sulfate reduction-associated complexes

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W1U3 at UniProt or InterPro

Protein Sequence (403 amino acids)

>AMB_RS17090 molybdopterin oxidoreductase (Magnetospirillum magneticum AMB-1)
MSSTTTYTQVRPYTRGWLALMAALGAVIAVALGAVFHMEHQGHWVTGMTNQVVWGLPHVF
AVFLIVAASGALNVASIGSVFGRQEYQPLGRLSSLLAVALLAGGLAVLVLDLGRPDRLFV
AMTHFNFKSIFAWNVILYSGFMAVVAVYLWTMMDWTRKRFYKPAALAAFGWRLILTTGTG
CIFGFLAAREAYGAAVMAPLFIAMSFAYGLAVFILVLSVSFKMTRRPLGDEVSTRLLRLL
GLFVAANLYFTALLHVTQLYFAGRSGVESFILLQGGLHTTLFWVGQVGLGGILPLVIAYG
GCGHAPRKRAMMASILVVLGGLAQVWVIIIGGQAWPLDLFPGMEASSTFADGHVHDYAPS
AWETMLGLGGVAIALVITTLGVTALRLLPAGLGETTSSCAGHK