Protein Info for AMB_RS16930 in Magnetospirillum magneticum AMB-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1134 PF00211: Guanylate_cyc" amino acids 384 to 531 (148 residues), 44.1 bits, see alignment E=9.2e-16

Best Hits

KEGG orthology group: None (inferred from 95% identity to mag:amb3347)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W1X4 at UniProt or InterPro

Protein Sequence (1134 amino acids)

>AMB_RS16930 hypothetical protein (Magnetospirillum magneticum AMB-1)
MAELAEALELVRGKKLVASADAETYTSLAGVFREAWLASGLRGDLEHCRELFLRAFHISN
ASRDGIDAAVTSWLLGDHDGARELARRVRDRVSHAETDLSLSPEERYQLLVTVAEAHLLL
GEVQDALASFAWASTLEGIHYGSTVAALKQLALLQEGGLVVPEAVFDIIKPPTVAVFTGH
PLDRPGEGPHFPPELEAAVRAEIAKSLDELGAQVGYSMAACGSDLLFIEAMLERGAEVNV
VMPYAIDDFIAENVRYGGSRWEMRFRNALKLANTVTYATEERYLGHGMLYRFANQCLHGL
ATLRANFLRTAPYLLAVWDMMPGSLVGGAADFIDQWEDISRLRIIDLDGLLQQFPDLAGD
YIPAMPDLDGDGDEEKGEGRVIRSMMFCDIAGYSKLKEEHTPVFLDFLRIISEGMAGLEH
QPLAINTWGDAIFAVMDKASPMAEYAQTLQEMVLKADEELADRLPHPLNLRISLHAGPVF
QAVDPICGRQNFYGSHINRAARLEPVTVIGHVYATQQFVAVLTAEQSAMRSEAQNRGEDF
AERFACEYVGVLSLAKDFGKQTVYHLRRRVSSEVMASPAVEEEPQSPEPNLQALLSSELL
AVMRAIPAEDEPAPAEEGPPVVEDEPPVAEDEPLVVEDEPLVVEDEPPVAEDEPLVVEDE
PPVAEDEPLVVEDEPPVVEDEPLVVEDEPPVAEDEPPVVEDEPPVVEDEPPVTEDEPPVA
EDESPIVEEEPSVVEDEQDHLDDQPSVPFSEGTLSDDDMAAILDMAEVAELGEDEEPAPA
APADLGELGSTILSDDDMAVLLDDASALVQEGTLSDDDLAAILSMGEVADLGDDEEPAPC
APAQLGDLGSTILSDADIAALLEEAGPDEEESAVEPPAGEEAEGTLSDEDLAGILAMGDP
EDQVEEDLHPPGAELTSTILSDADLTALLAEATEEEEFDAQLVADETVPKPDFSFHAAMS
DDDIAALLEESEEGEGEEGAPSAADLPALGSAMGFSDDDLAALSEQAVPCAPDGPPPSLF
DLGGAMSDDEIAALLEENNEEPLPEEDLPEIGAGAGFSEDDMRALLAEAEEAPAESSDAE
LAEVAAAVEAAMAKLEAEDGDDIALAPPRPKPAPTLRPFTGKVEISLAPPKREG