Protein Info for AMB_RS16870 in Magnetospirillum magneticum AMB-1

Annotation: ferric reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 444 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 38 to 59 (22 residues), see Phobius details amino acids 80 to 96 (17 residues), see Phobius details amino acids 141 to 158 (18 residues), see Phobius details amino acids 170 to 189 (20 residues), see Phobius details amino acids 195 to 214 (20 residues), see Phobius details PF01794: Ferric_reduct" amino acids 43 to 177 (135 residues), 57.4 bits, see alignment E=1.6e-19 PF08022: FAD_binding_8" amino acids 252 to 315 (64 residues), 24.7 bits, see alignment E=2.1e-09

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb3335)

Predicted SEED Role

"Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W1Y6 at UniProt or InterPro

Protein Sequence (444 amino acids)

>AMB_RS16870 ferric reductase (Magnetospirillum magneticum AMB-1)
MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALR
PKWLEPHLDGLDKIYRLHKWLGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQT
LGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPYHLFVKTHKWLAAAYLALAYH
SAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE
TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRE
RLKIGMPVTVEGPYGCFDFEDTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPT
TEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRAVVPEWQSASFWFCGPPGFGQ
ALRENFVANGLPPERFHQELFQMR