Protein Info for AMB_RS15370 in Magnetospirillum magneticum AMB-1

Annotation: cellulose synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 885 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 323 to 342 (20 residues), see Phobius details amino acids 354 to 372 (19 residues), see Phobius details amino acids 388 to 411 (24 residues), see Phobius details amino acids 697 to 721 (25 residues), see Phobius details amino acids 730 to 750 (21 residues), see Phobius details amino acids 762 to 783 (22 residues), see Phobius details amino acids 805 to 828 (24 residues), see Phobius details amino acids 840 to 863 (24 residues), see Phobius details PF00332: Glyco_hydro_17" amino acids 228 to 312 (85 residues), 31.1 bits, see alignment E=4.8e-11 PF13641: Glyco_tranf_2_3" amino acids 433 to 662 (230 residues), 95.4 bits, see alignment E=1.4e-30 PF00535: Glycos_transf_2" amino acids 436 to 607 (172 residues), 82.9 bits, see alignment E=6.8e-27 PF13632: Glyco_trans_2_3" amino acids 523 to 735 (213 residues), 83.3 bits, see alignment E=5.2e-27

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb3053)

Predicted SEED Role

"probable glucosyl transferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W2R8 at UniProt or InterPro

Protein Sequence (885 amino acids)

>AMB_RS15370 cellulose synthase (Magnetospirillum magneticum AMB-1)
MRLSGFVVLLLIVLGNLGFWAVMNRPQNAALPWSGTLNSVSFSAGRADDDPTIVRKLPYM
DEWLLPTRAEMDEDLAMLAGKVHQVRTYSTLEGLDQVPELAAKYGLKALPGAWLDERLGR
NEVEIANIIRIARDNPNVDRVIIGNENLTLHRLSPEQMIRYLRRVRAALPDRVKISTAEA
WAIWLDYPELTREVDFITIHTLPFWEPGGVHIDNALDFTKRMVRDVKAAYPDKPIFIGEV
GWPSAGRNYGVSEPSLVNQAMFLRNFVNWAHEEKLDYNIVEAFDQPWKVNLDNTASEKHW
GIYTVERQPKFSWIGPVLEFEEWPTQAITATLIALLPVVWFLGKWKTLRLPGKIFFALLV
QFASTLLIWTMSTPVIRDVSPGTGLMLGLMLPAQLLLLIVVLIAGIEVTELTWASKFKRR
FTALPPDQCKRFPKVSIHLPCYNEPPAMVKLTLDSLMALDYPNFEIIVLDNNTKKEEVWR
PVEEYCKTLGDKVKFFHLAPWPGAKAGALNFGLTVTDPEAEIIGVVDSDYMVDKNWLKGL
VPYFENPKVGHVQAPQDHREWEHDLFKEMINWEYAGFFDIGMVFRNEADAIIQHGTMTLV
RKKTLEDAGRWGEWCIVEDAELGLRMMKAGYQSVYVQDRLGHGLVPDSFMAYKKQRFRWA
YGAVQILKAHWRSLIPFKQTGLTTGQKYHFVAGWLPWFADAFYLLFCVAALAWSLGMIVA
PRYFSTPLPFFTLPTVGVFVAKIFHHFFLYTTRVNCGLKRRSLAAIAGMGLTYSIAWAMW
QGIFTKSTPFMRTPKMANKAAFTQGFLMASEEATLALLHYVAAIAVLIPRNNFTDPDVRI
WSLTLVVQAMPFLAALVASLISVMPSDGPAQPEHSHSNAKPEAAE