Protein Info for AMB_RS15085 in Magnetospirillum magneticum AMB-1

Annotation: allophanate hydrolase subunit 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02682: CT_C_D
  • amino acids 53 to 257 (205 residues), 235.9 bits, E=1.8e-74
• TIGR00370: sensor histidine kinase inhibitor, KipI family
  • amino acids 57 to 265 (209 residues), 163.2 bits, E=2.5e-52

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb2995)

Predicted SEED Role

"Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)" (EC 3.5.1.54)

MetaCyc Pathways

• L-citrulline degradation (3/3 steps found)
• L-arginine degradation V (arginine deiminase pathway) (3/4 steps found)
• cyanate degradation (2/3 steps found)
• urea degradation I (2/3 steps found)
• cyanuric acid degradation II (3/5 steps found)
• uracil degradation III (3/5 steps found)
• cyanuric acid degradation I (2/5 steps found)
• superpathway of allantoin degradation in yeast (2/6 steps found)
• superpathway of atrazine degradation (3/8 steps found)
• allantoin degradation IV (anaerobic) (2/9 steps found)

KEGG Metabolic Maps

• Arginine and proline metabolism
• Atrazine degradation
• Urea cycle and metabolism of amino groups

Isozymes

Compare fitness of predicted isozymes for: 3.5.1.54

Use Curated BLAST to search for 3.5.1.54

Sequence Analysis Tools

See Q2W2X6 at UniProt or InterPro

Protein Sequence (294 amino acids)

>AMB_RS15085 allophanate hydrolase subunit 1 (Magnetospirillum magneticum AMB-1)
MRNALEQPGRPGSSLHVSLRHRHSAKRKDKASTPLVRWDQPCFTLSMVMDNFRITDLGDT
AFAVEFGDGVDPAANARVTALRHGVLLARRQGGLAGLVETIPTFRSLLVQYDPLLTGRAV
LEAEIRAIAAQSAAAPAGGGRTWVIPACYDEDLGEDLAELGRAAGLSRDEAIALHTGAEF
TVYMLGFMPGFAYMGGVPEALRRPRRASPRLKVPPGSVALADALCAVYPWESPGGWHLIG
QTPVSFFDLGREPPILLAAGDRVRFRAMDRAEFEAARRDSTLVAPERLLLAEDP