Protein Info for AMB_RS14890 in Magnetospirillum magneticum AMB-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1133 PF13809: Tubulin_2" amino acids 6 to 289 (284 residues), 100.1 bits, see alignment E=7.9e-33

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb2958)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W313 at UniProt or InterPro

Protein Sequence (1133 amino acids)

>AMB_RS14890 hypothetical protein (Magnetospirillum magneticum AMB-1)
MAATNLFLGFGGTGAHILTFLKEFTVYKHGSKPDGVMFLEFDTIAGWKPGQTVDIAGGGG
GEEVVAKGYEEANSLQPQAEYFQLMDRHPSLRDLVTHHLSPAGNPGDYPQYRDWLHSQWL
STVMPPSVLNITAGSAQQRQIGRFSMFTNAEKIIAQLSKSLRELSRAAAGGGINVWVIGS
AAGGTGAGCMLDAGYLARLAAKQAGNIPITLLTAVIFPEVYSGKFGISQARAYSLFRELD
RLQEKHIPTYERYLRDGDQCSSEVQYDDRGALRSILPGRLFDYQIFLGRQCHDEAERVAF
FSSVANALDPYVDPNIGPQMMEELVNLNGLPFTVGGARLTMPLTTYAELFTWEMVDDVLV
RLFAPRQEGNQIVSLAWGSDTDRKTQAKAKVAGLLPLFGELLAVAAGPAEQVHGFAVNRL
NPREIVEKWYQFASAEVANRGLRQDELDYVIPLVYRNPLISLERPEEETSPKDIAVKTYE
DRRKAKEAKEDQEQSRNRFAGDLRSAVELYLDPKGGEGSFEHGRRTMRKAMTEVMRRAVD
ETIAAEFGRDGWVGTQPKAPDQGTPLTRLYGELRHLIGPEGPLNSIENMLAMVIESLQGQ
EKFAAQSATDALAELERARAGGLLSFGNWVEEPQRQARDRYSALIAWRQKRHLTEDMRDL
TREIRKRFEAWHHTVEEAVRSAVLSTDGSEPALKQVRDGNLARLKDRLLRMTRDASTMIS
LQPNDTTMQGFMTVLRNVAVMDQDRDLATAALEAAAWKAEIGEDGRPRLALNVGEAGFDG
TALARLHDALYARFRPAIDQRLQPFDIFDYLLYVKDRKGITTDAVVEQLGNAAKVLLDVS
CAGICRWVYARPSGEHKARLVDELNARLRPVAGDELRDAKQNHSDRTSLTLLRAAEPDPD
KIPNLLDCQRSYVQSLSKNLGMGAADDHEVQRSMIYHAFRGEAEAWFIERQFARERQTDI
QGADQLIPPRIARLLGAPDFCQAFIQCLAAQAIVRDEESLKWVWRIPDSEQKVVLSRDGA
TLDDDFISAAVTFILQRSEAKLGSRVTIGLDAARTSASHWSARINPGKPLHQVVADFVAP
AALDKFLATALPEPNVGDPVKSTLHRRNCAALGLIFRFYGRPGAQTALSSRNL