Protein Info for AMB_RS13190 in Magnetospirillum magneticum AMB-1

Annotation: Kef-type K+ transport systems

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 414 transmembrane" amino acids 6 to 23 (18 residues), see Phobius details amino acids 30 to 49 (20 residues), see Phobius details amino acids 68 to 87 (20 residues), see Phobius details amino acids 97 to 120 (24 residues), see Phobius details amino acids 135 to 156 (22 residues), see Phobius details amino acids 168 to 191 (24 residues), see Phobius details amino acids 200 to 221 (22 residues), see Phobius details amino acids 241 to 270 (30 residues), see Phobius details amino acids 277 to 300 (24 residues), see Phobius details amino acids 307 to 329 (23 residues), see Phobius details amino acids 356 to 389 (34 residues), see Phobius details PF00999: Na_H_Exchanger" amino acids 8 to 393 (386 residues), 126.4 bits, see alignment E=6.4e-41

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb2621)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W400 at UniProt or InterPro

Protein Sequence (414 amino acids)

>AMB_RS13190 Kef-type K+ transport systems (Magnetospirillum magneticum AMB-1)
MSLFLVQTALIIGLPYAVWRLGLIGRLMPLAAVQMAVGIALGPSLLGWVAPDVSARLFPP
ESLVALEGLVRLAVVFFAFSIGLHFDLAQIRGQGRCFTVLALSSVVVPTLAGAAGGWWLF
AAVPGAAGGLASQSLFAAAMGIAAGVTALPVLGAVVREMGLERHKVGVMALGAAAFNDAA
LWVAVALLLAISHGGDPWEAGLVALGALLFAGAMVTVVRPLLRRLFARAEASGKVGAGDV
VILTVGLALAALICEIIGLHAVIGAFLFGAVMPRRVAQAIVGSFETFVQVVLLPFFFISV
GLKTHAALGGGAAAIFWVMSAAAILGKLASALPAWMGGCTGREALTLGGLLTCKGLMELV
VLTLLAEAGLISQTSFGAMVLMALFATVMTKPLASVGCRPHPPGGKSSEPPFHS