Protein Info for AMB_RS13125 in Magnetospirillum magneticum AMB-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 469 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 49 to 70 (22 residues), see Phobius details amino acids 77 to 97 (21 residues), see Phobius details amino acids 124 to 148 (25 residues), see Phobius details amino acids 175 to 198 (24 residues), see Phobius details amino acids 206 to 227 (22 residues), see Phobius details amino acids 249 to 271 (23 residues), see Phobius details amino acids 285 to 305 (21 residues), see Phobius details amino acids 328 to 346 (19 residues), see Phobius details amino acids 362 to 395 (34 residues), see Phobius details amino acids 406 to 430 (25 residues), see Phobius details amino acids 442 to 466 (25 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb2608)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W413 at UniProt or InterPro

Protein Sequence (469 amino acids)

>AMB_RS13125 hypothetical protein (Magnetospirillum magneticum AMB-1)
MTGGRPSALLLLGMIACVLADVVVPAEMLRMGARLLLVAFLAAEWRRMAVNAKVMIGLAL
GLTMGAAVTGTAEPAKVIAGSLDTGAFFATFFANQFFLREAARTSPLVSRCSTFFVNQPP
GRRYALLTVGGYLFGIILNIGVLSLLGIMIKQRNSLEAAGGNEQIRDVRERRMVLALLRG
FSVTPLASPLSISLAVMLTALPSLHWSSMLPLGMATGAIVLGLGWLQDRLQAPVHLRGLA
PPVEPARDFAALGGVTALVLMVFFTALAFEWLLGVPLSRAMLVSTPLVGLGWLARQYLGG
GIASGMTATGRRVVVQAGATFPAYRTEIAILSSAGFIGTLFSAMIPPETLGALIASPLLP
PAILPALAILAVVGPALIGINPIVSVTIIASALSAAPSLPLSTESLALGLIGGWCLAINS
SAMTASAMLLGELVGKPSRTIVLGWNGLFTLAVFTVLSLWLTLLARLIQ