Protein Info for AMB_RS11660 in Magnetospirillum magneticum AMB-1

Annotation: phosphoribosyl-AMP cyclohydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 132 PF01502: PRA-CH" amino acids 35 to 108 (74 residues), 117.1 bits, see alignment E=1.3e-38

Best Hits

Swiss-Prot: 100% identical to HIS3_MAGSA: Phosphoribosyl-AMP cyclohydrolase (hisI) from Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)

KEGG orthology group: K01496, phosphoribosyl-AMP cyclohydrolase [EC: 3.5.4.19] (inferred from 100% identity to mag:amb2307)

Predicted SEED Role

"Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)" in subsystem Histidine Biosynthesis (EC 3.5.4.19)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.4.19

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W4W4 at UniProt or InterPro

Protein Sequence (132 amino acids)

>AMB_RS11660 phosphoribosyl-AMP cyclohydrolase (Magnetospirillum magneticum AMB-1)
MSAIDSAAVLAKIKFNADGLVPAIAQQHDTGEVLMMAWMNAESVAETLATGRVCYFSRSR
GGLWRKGETSGQQQRLKDFLIDCDGDTILLKVDQDGVACHTGRRTCFYTAARPEGLTEVA
KVQVSPDELYKK