Protein Info for AMB_RS09060 in Magnetospirillum magneticum AMB-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 444 transmembrane" amino acids 7 to 26 (20 residues), see Phobius details amino acids 32 to 50 (19 residues), see Phobius details amino acids 59 to 78 (20 residues), see Phobius details amino acids 128 to 153 (26 residues), see Phobius details amino acids 179 to 201 (23 residues), see Phobius details amino acids 209 to 230 (22 residues), see Phobius details amino acids 251 to 272 (22 residues), see Phobius details amino acids 278 to 296 (19 residues), see Phobius details amino acids 329 to 347 (19 residues), see Phobius details amino acids 353 to 374 (22 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb1790)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W6D1 at UniProt or InterPro

Protein Sequence (444 amino acids)

>AMB_RS09060 hypothetical protein (Magnetospirillum magneticum AMB-1)
MTGGKIGAVLSPLAIIVVINGAVGWALFRWQWASDGAGAALLLYLALEWPAMSRGGRKML
AVCSAAALVATLFLPQALPVLRHGMAEAAFIVGLFTTLGMLRDSAQTSHLIHRCGEQMVR
QRPGRRYAALSLGSHLISLVLNFGVLALLGVMVAKGNTLNAANGDEIVKNIRKRRMMTAI
MRGFAMMTVWSPLAVSFTVIQQVVPGLAWWHLLPLQVALSLILMGWGWILDRLDFPPHTR
RLPPHRHKTDFRPILGLVLLVGAIVVGAVALAEALGTRLVVGAMMVVPPAAVIWLFTQQE
GPVLRRAATTAGLFLRRLGTSLPGARSEVAMLGGAMFLGTVVAAFISPEDTARVIALVPL
PPIALAVLLAWGVMVRPIWASRSCHHHLAGQCAGQPFGGRHQSADHGQRHAGRLGPVHLH
HPGGSGGDVGGPGGRVPVKTVSGP