Protein Info for AMB_RS07820 in Magnetospirillum magneticum AMB-1

Annotation: UDP pyrophosphate phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00753: undecaprenyl-diphosphatase UppP
  • amino acids 4 to 251 (248 residues), 230.3 bits, E=1.6e-72
• PF02673: BacA
  • amino acids 4 to 252 (249 residues), 263.6 bits, E=1.2e-82

Best Hits

Swiss-Prot: 100% identical to UPPP2_MAGSA: Undecaprenyl-diphosphatase 2 (uppP2) from Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)

KEGG orthology group: K06153, undecaprenyl-diphosphatase [EC: 3.6.1.27] (inferred from 100% identity to mag:amb1547)

Predicted SEED Role

"Undecaprenyl-diphosphatase (EC 3.6.1.27)" (EC 3.6.1.27)

MetaCyc Pathways

• polyisoprenoid biosynthesis (E. coli) (5/5 steps found)
• di-trans,poly-cis-undecaprenyl phosphate biosynthesis (2/2 steps found)

KEGG Metabolic Maps

• Peptidoglycan biosynthesis

Isozymes

Compare fitness of predicted isozymes for: 3.6.1.27

Use Curated BLAST to search for 3.6.1.27

Sequence Analysis Tools

See Q2W724 at UniProt or InterPro

Protein Sequence (261 amino acids)

>AMB_RS07820 UDP pyrophosphate phosphatase (Magnetospirillum magneticum AMB-1)
MLEALLLGVVEGLTEFLPISSTAHLMLIGDMLGFEGPPGKTYEIVVQLGAILAVCVVFRQ
RLWGVATTITQPRSFAFARNVMVAFLPAAVIGATLYKYIKQMLESPLVAAIALVVGGVAI
LVIERLVKRARIHDIEDMSPALALGVGFCQVLAMVPGVSRAGATIMGSMLLGLDRRAAAE
FSFFLAIPTMCGASAYSLYKNWATLSFDGAGLIALGFVAAFLSALVVVKGFIGFVGRHGF
APFAWYRIAFGSLMAVLILMR